Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1465 ATGTCTTCGTGTTTGACCGGAGCTGGAGGAAGAACCTACGGGTTCGATTTCGAATTTGTTAAATCTTCATCTTCTTCCACCAGAACCTCACACACCTCTTCTTCACCTTCTTCAACAATCTCCGAATCCAGCAATTCGGCCCTCGCAATCTCCACGAAGAAACCCAGAACGCCTCGAAAGCGACCCAACCAAACCTACAATGAAGCCGCGGCGCTTCTCTCCACCGCCTACCCCAACCTCTTCTCCACGAAGAACCTCAAAACGCAGGGCAAATTCGCAAAGCCCGCGTCGGAGAATTTTGATTATGACTCTTCGGAGCTGTTGTTGCCATTCAGGGTTTTGGACGGGTCGTCGTCGTGTTTCCTTCTGGACCAACCGGGCCCGAAGCCCTTGGAGAGGCCCAAAGAGGTGAGCGTGCAGGAGAAGGCGTGTGGGAGCCCCGGGGAGATAAGCTCTGTAGTGAATTTCAATTACCTAGAATTGAACGACGATTGCGAAGAGAGCCTCGATGCGGAATCGATTCTCGACGAGGAAATCGAAGAAGGGATCGATAGCATCATGGGGAGCAGGGTGCAAGATGTCTCAAACGACGCCGTCAGTAACTTTCCCTGGATAATGCCTTTTGGCGGGAAATCCGACTTCCCCAGACCCCGTGTCAGCGCTCTCCGACACGTCGACGACGGAAACTGGTGGAATTTTCCGGTCGTTGATATTCTTCAAATATCGCCCAAAATTAACGCCAAGCCTCCTCCGGTGACCGCCGAGAAGAAGATGAAGAAGAAGAAGGTGGCAGCGATTGCGGCGACGGAGAAACCGGTCGTAGTGGAGTTGAAGAACGTGGAATTGCCCAAACCGAAACAAGGTTTGATGTTGAAATTGAATTACGACGACGTTCGGAGCGCTTGGTCCGACCGTGGGATACCGTTCTCCGACGATAGCCCCCTGGCCGACTTGCCGGAAGCTGACGTCACTGCGCGGCTGTCACAAATTGATTTGTGGTGGGACAATGGCGGAGTGAGAGAAGCTAGCGTGCAGCGCTACAAAGAGAAACGGCGAACGAGGCTGTTCTCGAAGAAGATCAGATACCAGGTGAGGAAGGTCAACGCAGATCGACGCCCCAGAATGAAGGGGCGATTTGTTAGGAGGCTCAATTCTAGCTCAAATGCACACAGATGA 1176 0.5281 MSSCLTGAGGRTYGFDFEFVKSSSSSTRTSHTSSSPSSTISESSNSALAISTKKPRTPRKRPNQTYNEAAALLSTAYPNLFSTKNLKTQGKFAKPASENFDYDSSELLLPFRVLDGSSSCFLLDQPGPKPLERPKEVSVQEKACGSPGEISSVVNFNYLELNDDCEESLDAESILDEEIEEGIDSIMGSRVQDVSNDAVSNFPWIMPFGGKSDFPRPRVSALRHVDDGNWWNFPVVDILQISPKINAKPPPVTAEKKMKKKKVAAIAATEKPVVVELKNVELPKPKQGLMLKLNYDDVRSAWSDRGIPFSDDSPLADLPEADVTARLSQIDLWWDNGGVREASVQRYKEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNSSSNAHR* 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1465 391 ProSiteProfiles CCT domain profile. 340 382 IPR010402 GO:0005515
Pvu3g1465 391 MobiDBLite consensus disorder prediction 22 52 - -
Pvu3g1465 391 Pfam CCT motif 340 381 IPR010402 GO:0005515
Pvu3g1465 391 PANTHER OS02G0148000 PROTEIN 1 386 - -
Pvu3g1465 391 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 1 386 - -
Pvu3g1465 391 MobiDBLite consensus disorder prediction 22 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1465 Pvu-Chr3 33489098 33492555 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1465 279 382 C2C2-CO-like Transcription Factor Family AT1G68520 43.802 3.42e-22 95.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Pvu3g1465 CCT 5.2e-17 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1465 - - gmx:100810303 633.639
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1465 3 33489098 33492555 Pvu3g1465 3 33489098 33492555 ECH
Pvu3g1465 3 33489098 33492555 Pvu9g2441 9 34798081 34799172 PCT