Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1443 ATGTCACTATTAAACCAACTCAAACACGCCTCTCAGAATTTCTTTCTCATTCTTTCTCTGCCTTTCTGCCAAGTTAACAGCAGAAACAACTTAATGGGGAACTGTTGGAGTTTTCAATTAGGTTCTGCTGTCGATCATCGAAACTCCAGTACTGCCCCCAACCCCAACAATCGACCAGATGATCCGGGGAGTATTCAGTTTTCTGCTGGTCTAAGCAACAAAAGGTTAATACAGAATAGTAATTCTACTTCTCTTGGGCATAGCAGCCACTCTGGAGGAATCAGCAGGTTCTTTGGACCAAGTAGTAGTAATAACTACTCAACAGGCAATAACACTAGCACATCCTTATGGGGCTCTGAGAATAGCCAAGCTTCTCGAGTCAGGGATGAAGAGGAGAGGGGGCAAATCTTGGATGTTGCAGATTTGAGAGAATTTACTTTGGCAGATCTGAAAGCAGCCACCAGAAATTTTAGAGCTGACTCTCTGTTGGGGGAGGGGGGATTTGGTAAAGTATACAAGGGTTTGATTAGAGGTGAGGGGTTGGCTATTGCCATCAAGAAGTTGAATTCTGAAAGCAAGCAAGGATTTGTGGAATGGCAGTCAGAGATTAATTTCTTAGGGAGGCTTTCTCATCCCAACCTCGTTAAATTGTTGGGATTTGGGAGGCATGATGGTAAACTGTTTCTGGTATATGAATTTATGCCTCGTGGCAGCTTGGATAACCACCTATTTGGAAGAGGAGCAAATGTTCGGCCACTTTCTTGGGACACAAGGCTAAAAATTATGATTGGAGCAGCTAGGGGGTTGCATTTCCTTCACAGCTTGGAGATTCCGATTATATATAGAGATTTGAAACCCTCAAATATCCTACTCGACTCAACATATGCGGCTAAGTTATCAGATTTTGGCTTAGCCAAGTCTGTTGCTTCGCCTGATCAAAGTCACGTATCAACACAGGTTGTGGGAACATACGGCTATGCTGCTCCTGAGTACATTGTAACAGGCCGTTTGTACGTGAAAAGTGATGTGTATGGATTTGGAATTCTTTTGGTGGAGTTGCTGACAGGCAAGAGGATTACTGGTATAATGAAACTATGTGAGGCAACGTCCCTGAGGGATTGGGTCAAAAGAAATCTTCTAAACAGAGGCTTTTTAAGAAGCACTATGGATGCAAAGTTGGAAGGAAAGTATCCTTCCAACTTAGCATTACAAATGGTTCAACTAGCTCTCAAATGCATCCAAACAGAACCCAAAGTGAGACCATCAATGAAAGAAGTTCTTGAAAGACTGGAACAAATTGAAGCAGCCAATGAAAAACCAGCTGATAACAGAAGACAGGTTAATCGTTCTCGGGTTGTTCAACAACATGGCCGTGAAGATGTTGGCTAA 1389 0.4284 MSLLNQLKHASQNFFLILSLPFCQVNSRNNLMGNCWSFQLGSAVDHRNSSTAPNPNNRPDDPGSIQFSAGLSNKRLIQNSNSTSLGHSSHSGGISRFFGPSSSNNYSTGNNTSTSLWGSENSQASRVRDEEERGQILDVADLREFTLADLKAATRNFRADSLLGEGGFGKVYKGLIRGEGLAIAIKKLNSESKQGFVEWQSEINFLGRLSHPNLVKLLGFGRHDGKLFLVYEFMPRGSLDNHLFGRGANVRPLSWDTRLKIMIGAARGLHFLHSLEIPIIYRDLKPSNILLDSTYAAKLSDFGLAKSVASPDQSHVSTQVVGTYGYAAPEYIVTGRLYVKSDVYGFGILLVELLTGKRITGIMKLCEATSLRDWVKRNLLNRGFLRSTMDAKLEGKYPSNLALQMVQLALKCIQTEPKVRPSMKEVLERLEQIEAANEKPADNRRQVNRSRVVQQHGREDVG* 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1443 462 SUPERFAMILY Protein kinase-like (PK-like) 142 436 IPR011009 -
Pvu3g1443 462 ProSiteProfiles Protein kinase domain profile. 157 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1443 462 MobiDBLite consensus disorder prediction 108 123 - -
Pvu3g1443 462 SMART serkin_6 157 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1443 462 Gene3D Transferase(Phosphotransferase) domain 1 234 458 - -
Pvu3g1443 462 ProSitePatterns Protein kinases ATP-binding region signature. 163 187 IPR017441 GO:0005524
Pvu3g1443 462 MobiDBLite consensus disorder prediction 46 68 - -
Pvu3g1443 462 CDD STKc_IRAK 163 433 - -
Pvu3g1443 462 ProSitePatterns Serine/Threonine protein kinases active-site signature. 279 291 IPR008271 GO:0004672|GO:0006468
Pvu3g1443 462 MobiDBLite consensus disorder prediction 437 462 - -
Pvu3g1443 462 Gene3D Phosphorylase Kinase; domain 1 141 233 - -
Pvu3g1443 462 PANTHER TRANSFERASE, PROTEIN KINASE RLK-PELLE-RLCK-VIIA-2 FAMILY-RELATED 43 462 - -
Pvu3g1443 462 Pfam Protein kinase domain 159 428 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1443 462 MobiDBLite consensus disorder prediction 108 132 - -
Pvu3g1443 462 PANTHER OS01G0588500 PROTEIN-RELATED 43 462 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1443 Pvu-Chr3 33166161 33168749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1443 128 430 Glycoside Hydrolase AT3G07070 42.763 4.35e-81 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu3g1443 Pkinase 1.6e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1443 - - pvu:PHAVU_003G139200g 893.649