Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1427 ATGACATTATTGACCAACACTTTTGAATCAGAATGCTTGCTTCTGTTCCCAAGAATGCCTCGGAGAATACTTCAAGTGACTGCAGAGGAACCTCCTTCATCCTCTGTGGCTCTGAAAACCTCCGCGTCACGCTACGCCCCTGGAGTGTTCTTCTTCCTTGGGGGGACTGTATTGCTCATCATATTGCTCATTCTTCTGTTTATATTTTGGAGGCGTACTAAGGGGCCAGCAAAGGTGACGGAGAACACAACACTAACAGGGAAATATATTGAACCGTCTGAGGTGATGAAGATGATAGTCCCAAATATTCAACAAGGACAGATGGAGTTCATTAGTGGGAACCTTCGGACAATTAGCTACTTTGACTTCCGGACATTGAGGAGAGCCACTAAGAATTTCCATCCTCGAAATCTGCTTGGAAGTGGTGGATTCGGGCCTGTCTATCAGGGCAAGTTGGCAGATGGAAGGCTTGTTGCAGTAAAGACATTGTCTCTTGACAAGTCTCAACAAGGAGAAAAAGAATTTCTGGCAGAAGTGAGAATGATCACAAGCATCCAACACAAAAATCTGGTTCGCCTTATCGGATGCTGCACAGATGGGCCTCAAAAGATACTCGTGTACGAATATATGAAGAACAGAAGTTTGGACCTCATAATTTATGGAAAGAGTGATCAATTTCTGAATTGGAACACTAGATTCCAAATTATTCTTGGTGTAGCACGGGGATTGCAATACCTCCACGAGGATTCGCAGTTAAGAATTGTTCACCGAGACATCAAAGCAAGCAACATTCTTCTTGATGAGAAGTTTCAGCCTAGGATTGGAGACTTTGGGCTAGCTAGGTTCTTCCCTGAAGACCAAGCTTATCTTAGCACTCAGTTCGCAGGAACATTAGGTTATACAGCTCCTGAGTATGCCATTAGAGGAGAGTTGTCCGAAAAGGCAGACATCTATAGTTTCGGAGTTCTTGTGCTTGAAATCATCAGTTGCAGGAAAAACACAGACCTTACTTTACCATCAGAAATGCAGTACCTCCCTGAATATGCATGGAAACTTTATGAGAAGTCAATGTTGATGGAAATAGTGGATCCAAAGCTGCGAGAACATGGCATGGAAGAAAAGGATGTTATGCAAGCATTTCAGGTGGCCTTATCGTGCCTTCAGCCACATGCAGATTTGAGACCTGCGATGTCAGAAATTGTAGCATTGCTGACATTCAAAGTTGAAATGGTTACCGCGCCAATGAGACCAACCTTCTTTCATAGGAGGCGCGTAATGGATGATGAGAACCATTCTTGGGGAGCCATATCCTCAGAGGGTTCTACAACTGCAGTGACATCATCCTAG 1347 0.4402 MTLLTNTFESECLLLFPRMPRRILQVTAEEPPSSSVALKTSASRYAPGVFFFLGGTVLLIILLILLFIFWRRTKGPAKVTENTTLTGKYIEPSEVMKMIVPNIQQGQMEFISGNLRTISYFDFRTLRRATKNFHPRNLLGSGGFGPVYQGKLADGRLVAVKTLSLDKSQQGEKEFLAEVRMITSIQHKNLVRLIGCCTDGPQKILVYEYMKNRSLDLIIYGKSDQFLNWNTRFQIILGVARGLQYLHEDSQLRIVHRDIKASNILLDEKFQPRIGDFGLARFFPEDQAYLSTQFAGTLGYTAPEYAIRGELSEKADIYSFGVLVLEIISCRKNTDLTLPSEMQYLPEYAWKLYEKSMLMEIVDPKLREHGMEEKDVMQAFQVALSCLQPHADLRPAMSEIVALLTFKVEMVTAPMRPTFFHRRRVMDDENHSWGAISSEGSTTAVTSS* 449
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1427 448 Pfam Protein tyrosine and serine/threonine kinase 137 403 IPR001245 GO:0004672|GO:0006468
Pvu3g1427 448 PANTHER RECEPTOR-LIKE KINASE 112 419 - -
Pvu3g1427 448 ProSitePatterns Serine/Threonine protein kinases active-site signature. 254 266 IPR008271 GO:0004672|GO:0006468
Pvu3g1427 448 Gene3D Transferase(Phosphotransferase) domain 1 210 413 - -
Pvu3g1427 448 SMART serkin_6 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1427 448 Gene3D Phosphorylase Kinase; domain 1 103 209 - -
Pvu3g1427 448 SUPERFAMILY Protein kinase-like (PK-like) 114 407 IPR011009 -
Pvu3g1427 448 CDD STKc_IRAK 139 405 - -
Pvu3g1427 448 ProSiteProfiles Protein kinase domain profile. 133 406 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1427 448 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 112 419 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1427 Pvu-Chr3 33006422 33009758 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1427 121 420 Receptor kinase-like Gene Family AT1G56120 49.333 3.87e-100 317
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g1427 PK_Tyr_Ser-Thr 1.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1427 - - ccaj:109792436 719.153
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1427 3 33006422 33009758 Pvu9g2412 9 34411855 34415844 PCT