Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1401 ATGGGAGATGAAATGGCAAGAGTGAAAGCGGAGATCTTCGACGACAGCGAAAGCGATCTCCACGACGACGTTTTCAGCGAGAGCAAGGCCTCCGGAGTGACGGAAGACCCAACCACGGTTCACGTCAAAGAAGAGGTGGATGACGGCGCCGTCAACGGTTTCATGGATAAGATGCCGAAAACGATGGAAGGGCTGCACGAGATGGGTCCCCCACCGTTCCTCAAGAAGACCTTCGAAATGGTGGAGGACTCCCACACTGACCCCGTTGTGTCCTGGAGTCAAACTCGCGATAGTTTCGTCGTTTGGGACTCCCACGAATTCTCCAAAACCCTTCTTCCCAAATACTTCAAGCACAGCAATTTCTCCAGCTTCGTTCGCCAGCTCAACACCTATGGCTTCAGGAAGGTTGATTCAGACCGTTGGGAGTTTGCGAATGAAGGATTCCAAGGAGGGAAGAAGCATTTGCTAAAGAACATAAGGAGGAGGAGTAAGTACACCAGACTGCATCAGGGAGCTTTCACTATGGTGAAGCCCGGCGTGGAGGCTGAAATGGAGAAACTGAAGAAGGACCAGAACATTTTGAAGGTTGAAATTCTGAAACTGAGGCAGCAGCAGGAGAATTCGCATGTTCAGCTCACAAATGTTCAGGAGAGAGTTCGGTGTGCAGAGATGAAGCAGTATCAGATGATGTTTTTCCTCACTAGAATGGCTAGAAGGCCCGCGTTTGTTGAGCAGTTAATCCAAAAGATTAGGAGAAAAAGAGAGGTTGATGGTAACGACATGGTTAAGAGGCCTAGATTGATGGGAAACCCCTGCTCTGTACCCTTCCCCAAGACCATGGGGACAACCCCTAATGTTGATTATAGACACCAAACTCATAAACAATTCCCCTCAATGCAATCCGAGCTTGAAGGATTTCTGTCTGAAACTGTGAACATCAGCAAGTTGGAGCACCCAACTCCCTCTCCTTTGGAAGATGAATTATGTAACTCTGTGCAAGGATTAAGGGCCCATGGTTGTTCCAGCGCAAATGCGCCAGATGCTTCTTCTGCCTATCATGTTATGTCAGAAAAACTAATGCGGGAAAATTCTCTAGTTGATGAAGAACTAGATGTCAATGACTCGAATATCTATCTTGAATTAGAGGATTTGATCACTAAGCCAACGGATTGGTCTCTTGGATCTACATTTGGATTGGTGGAGCAAACTAGTTGA 1215 0.4733 MGDEMARVKAEIFDDSESDLHDDVFSESKASGVTEDPTTVHVKEEVDDGAVNGFMDKMPKTMEGLHEMGPPPFLKKTFEMVEDSHTDPVVSWSQTRDSFVVWDSHEFSKTLLPKYFKHSNFSSFVRQLNTYGFRKVDSDRWEFANEGFQGGKKHLLKNIRRRSKYTRLHQGAFTMVKPGVEAEMEKLKKDQNILKVEILKLRQQQENSHVQLTNVQERVRCAEMKQYQMMFFLTRMARRPAFVEQLIQKIRRKREVDGNDMVKRPRLMGNPCSVPFPKTMGTTPNVDYRHQTHKQFPSMQSELEGFLSETVNISKLEHPTPSPLEDELCNSVQGLRAHGCSSANAPDASSAYHVMSEKLMRENSLVDEELDVNDSNIYLELEDLITKPTDWSLGSTFGLVEQTS* 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1401 404 Gene3D - 65 163 IPR036388 -
Pvu3g1401 404 SMART hsfneu3 69 162 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 Coils Coil 184 204 - -
Pvu3g1401 404 PANTHER HEAT STRESS TRANSCRIPTION FACTOR A-9 52 388 - -
Pvu3g1401 404 ProSitePatterns HSF-type DNA-binding domain signature. 112 136 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 SUPERFAMILY "Winged helix" DNA-binding domain 69 162 IPR036390 -
Pvu3g1401 404 Pfam HSF-type DNA-binding 73 162 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 PRINTS Heat shock factor (HSF) domain signature 73 96 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 PRINTS Heat shock factor (HSF) domain signature 111 123 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 PRINTS Heat shock factor (HSF) domain signature 124 136 IPR000232 GO:0003700|GO:0006355|GO:0043565
Pvu3g1401 404 PANTHER HEAT SHOCK TRANSCRIPTION FACTOR 52 388 IPR027725 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1401 Pvu-Chr3 32657019 32659341 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1401 59 402 HSF AT2G26150 41.026 9.43e-79 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HSF Pvu3g1401 HSF_DNA-bind 1.8e-32 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1401 K09419 - gmx:100818430 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1401 3 32657019 32659341 Pvu3g1401 3 32657019 32659341 ECH