Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1390 ATGGAGGAAATATCTTCGAGTGTTGCAGTACCTTTTACACTTGGTGTTGGAAATTTGATTCAAAAAGAGTCTGCTGTGACAACTCACATGGAGATAACAGGGCTGAAGCTTATGGCAAATACTGCAGCGGCTGCTTTGATGTTAAATCCTGCAGTGGAGTGTTGTCAGTCATATTCTGTTGGAAGTGAAAGCCATGCAGATGTTAGTCTGCAGCACCAGATTACGGTATCTGCGGAGGTAAAGGAGAATCAAGTTGGAGATGCCCTTCTCTCAGAAATGATTATTGAATGTGAGAGTAATTGGGTTTTGAATGAAACCCATCACAAGGCTAGAAAGGAAGATGAAGTAATGGTAGCTGTGGATTTTCACTGTCTACATAATTCAAGCTCTGTGGCTAATGGCCAAAGTGATTCTTGTAGGGAGGAAGCTGTGCCTTTGAAGGCTAGTTATTCTGAAACAGAATCACCAATCACCATGAATGTTAATGATGATGTTCATGGCATGTCTGGAGCAAACGAGCCGTGTCCATCAATGAAGCCAGTGGAAAACACAGTTTCTGTTGCAATGGACATTACTAGTGAGGATCAAAGTGGATCTGATGAGTCTGATCCTAAATTATCTGCTGTGCTTCTTGACCAGTTGCGTGGGGAGAATAAAACATGGACAACAAGCAACAAAAATGCTTTGGAATCGAATAGTGGCCCTCTGTGGGGTTATTCATCAATTTGCGGAATGAGACAGGAGATGGAAGATGTTATTTCTGTTAAGCCTCAACTTTTTCAAGTTCCTTCACAGATGCTGATGAATGACCACGTAAATGAGAACGAAAAACAGTCACTAGCCCACTTTTTCGCCGTCTACGATGGACATGGGGGCCTTCAGGTTGCTAACTACTGCCAGGAACGTCTTCATTCAGTATTGATTGAGGAGATAGAGGCTGCACAATCAAGTTTGGCTGAAACAAATGGGAGGGATGATTGGCAGGACCATTGGAAGAAAGCATTCATGAATTGTTTTCAGAGAGTAGATGATGAGGTTGGAGGAACTGGTGCAAGTAATAATGGAAACAACAGTGGTGGATCTGAGTCTCATATTGAACCCGTTGCTGCTGAGACTGCTGGTTCCACTGCAGTGGTCGCTATTTTAAGTGAAACCCTCATAATAGTTGCAAATTGTGGAGATTCAAGAACTGTCTTATACCGTGGAAAAGAAGCCATGCCACTGTCTTCTGACCACAAACCAAATAGAGAGGACGAGCGGGCAAGGATAGAAGCTGCAGGAGGAAGAGTCATACATTGGAAAGGATATCGAGTTCTTGGTGTCTTGGCAATGTCAAGGTCCATAGGTGATAGATACCTCAAGCCATGGATAATTCCAGAACCTGAAGTCAATATTGTGCGTAGAGAGAAAAATGATCAGTGTCTCATTCTAGCAAGTGATGGTTTATGGGATGTAATGACAAATGAAGAAGCCTGCGAGGTTGCTAGGAAGAGAATCCTTGTTTGGCACAAAAAGTTTGGTGAAAACGGAGCAACAGGACTTGGCGAAGGAGCTGATCCGGCAGCACAGTCTGCTGCAGAGTATCTAACAAAGCTTGCCATTCACAGGGGAAGCCAAGATAACATCTCTGTAATTGTGATAGACTTAAAGGCTCAAAGAAAAATTAAGAGAAAGCCTTAA 1680 0.4304 MEEISSSVAVPFTLGVGNLIQKESAVTTHMEITGLKLMANTAAAALMLNPAVECCQSYSVGSESHADVSLQHQITVSAEVKENQVGDALLSEMIIECESNWVLNETHHKARKEDEVMVAVDFHCLHNSSSVANGQSDSCREEAVPLKASYSETESPITMNVNDDVHGMSGANEPCPSMKPVENTVSVAMDITSEDQSGSDESDPKLSAVLLDQLRGENKTWTTSNKNALESNSGPLWGYSSICGMRQEMEDVISVKPQLFQVPSQMLMNDHVNENEKQSLAHFFAVYDGHGGLQVANYCQERLHSVLIEEIEAAQSSLAETNGRDDWQDHWKKAFMNCFQRVDDEVGGTGASNNGNNSGGSESHIEPVAAETAGSTAVVAILSETLIIVANCGDSRTVLYRGKEAMPLSSDHKPNREDERARIEAAGGRVIHWKGYRVLGVLAMSRSIGDRYLKPWIIPEPEVNIVRREKNDQCLILASDGLWDVMTNEEACEVARKRILVWHKKFGENGATGLGEGADPAAQSAAEYLTKLAIHRGSQDNISVIVIDLKAQRKIKRKP* 560
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1390 559 ProSitePatterns PPM-type phosphatase domain signature. 283 291 IPR000222 GO:0043169
Pvu3g1390 559 ProSiteProfiles PPM-type phosphatase domain profile. 236 549 IPR001932 -
Pvu3g1390 559 CDD PP2Cc 238 549 IPR001932 -
Pvu3g1390 559 PANTHER PROTEIN PHOSPHATASE 2C ABI2-LIKE PROTEIN 106 559 - -
Pvu3g1390 559 Gene3D - 223 559 IPR036457 -
Pvu3g1390 559 SUPERFAMILY PP2C-like 232 550 IPR036457 -
Pvu3g1390 559 SMART PP2C_4 226 547 IPR001932 -
Pvu3g1390 559 Pfam Protein phosphatase 2C 260 542 IPR001932 -
Pvu3g1390 559 PANTHER ALPHABET, ISOFORM E-RELATED 106 559 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1390 Pvu-Chr3 32504650 32508475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1390 168 559 PP2C-type Phosphatase Gene Family AT4G26080 53.250 2.99e-133 393
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1390 K14497 - gmx:100789207 875.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1390 3 32504650 32508475 Pvu3g1390 3 32504650 32508475 ECH
Pvu3g1390 3 32504650 32508475 Pvu9g2376 9 33939666 33943447 PCT