Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1389 ATGAAGAAAGGAAACTTGGGGCTTGGTCTCAAACTCTCAGTTCCTGTTTCTGATCAATCTAATTTTGCCAAGTTCCTGACTGAAAGTGGGACTTTTAAGGATGGGGATCTGCTTGTCAACAGGGATGGAGTTCGAATTGTTTCTCAGAGTGATGTCGAAGCTGCACCTCCAATCAAGCCTACAGACGACCAGTTAACTTTGGCAGATGTAGATGTCATCAAAGTTGTTGGAAAGGGAAATGGAGGGGTTGTCCAATTGGTACAACACAAATGGACTAGTCAGTTTTTTGCATTGAAGGTCATTCAAATGAATATTGAAGAGTCTATGCGAAAGCAGATTGCACAAGAGCTGAAAATTAATCAACAGGCACAGTGTCCTTATGTTGTTGTCTGCTATCAATCATTTTATGAAAACGGTGTCATATCAATCATCTTAGAGTACATGGATGGGGGTTCCTTAGCTGATCTACTGAGGAAAGTTAAAACAATTCCAGAGCCTTTTCTTGCTGCCATCTGTAAGCAGGTGCTGAAGGGTTTAGTTTACCTTCACCATGAAAAGCATATTATCCACAGAGACTTAAAACCCTCTAATTTGTTAATAAATCATATAGGAGAAGTAAAGATTACTGACTTTGGTGTGAGTGCAATTATGGAAAGTACATCTGGTCAAGCAAATACCTTCATTGGAACTTACAACTATATGTCTCCAGAGAGAATCAATGGAAACCTGCGAGGCTACAACTACAAAAGTGATATATGGAGTTTGGGGCTGATATTGCTTGAGTGTGCTTTGGGGCGATTTCCATATACACCAGAAGATCAAAGTGAAAGTTGGGAAAGCATTTTCGAGCTTATTGAAACCATTGTTGATAAACCTCCTCCTATTCCTCCATCTGAACAATTTTCTACAGAATTTTGCTCATTTATCTCAGCATGTCTACAGAAAGACCCAAAGAATCGACTGTCAGCTCAGGAATTAATGGAACATCCTTTTGTCAACTTGTATGATGACTCGGAGGTGAATCTTTCATCTTACTTCTCCAATGCTGGATCTCCTCTTGCTACCTTGTAA 1071 0.3978 MKKGNLGLGLKLSVPVSDQSNFAKFLTESGTFKDGDLLVNRDGVRIVSQSDVEAAPPIKPTDDQLTLADVDVIKVVGKGNGGVVQLVQHKWTSQFFALKVIQMNIEESMRKQIAQELKINQQAQCPYVVVCYQSFYENGVISIILEYMDGGSLADLLRKVKTIPEPFLAAICKQVLKGLVYLHHEKHIIHRDLKPSNLLINHIGEVKITDFGVSAIMESTSGQANTFIGTYNYMSPERINGNLRGYNYKSDIWSLGLILLECALGRFPYTPEDQSESWESIFELIETIVDKPPPIPPSEQFSTEFCSFISACLQKDPKNRLSAQELMEHPFVNLYDDSEVNLSSYFSNAGSPLATL* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1389 356 SMART serkin_6 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1389 356 CDD PKc_MAPKK_plant_like 85 336 - -
Pvu3g1389 356 PANTHER MITOGEN-ACTIVATED KINASE KINASE KINASE 1 356 - -
Pvu3g1389 356 Pfam Protein kinase domain 72 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1389 356 SUPERFAMILY Protein kinase-like (PK-like) 67 340 IPR011009 -
Pvu3g1389 356 PANTHER MAP KINASE KINASE 1 356 - -
Pvu3g1389 356 Gene3D Phosphorylase Kinase; domain 1 44 149 - -
Pvu3g1389 356 ProSitePatterns Serine/Threonine protein kinases active-site signature. 188 200 IPR008271 GO:0004672|GO:0006468
Pvu3g1389 356 Gene3D Transferase(Phosphotransferase) domain 1 150 352 - -
Pvu3g1389 356 ProSiteProfiles Protein kinase domain profile. 70 332 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1389 356 ProSitePatterns Protein kinases ATP-binding region signature. 76 99 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1389 Pvu-Chr3 32499664 32504578 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1389 1 327 MAP Kinase Kinase Gene Family AT4G29810 66.964 2.44e-170 476
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE7 Pvu3g1389 Pkinase 6e-70 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1389 3 32499664 32504578 Pvu3g1389 3 32499664 32504578 ECH
Pvu3g1389 3 32499664 32504578 Pvu9g2375 9 33934787 33939650 PCT