Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1377 ATGCTTACGTGCATAGCTCGTCCGAAGAAACCTGATGAGTCGGATCCAAACAGTGGGACAAGCGCTGCTAAATCGCAAGCCATCAAATCCCTCACCTCTCAGATAAGGGATATGGCGTTGAAGGCTTCGGGAGCTTACAAGCATTGCGCTCCGTGCACGGGGCCAGCGGCTCAGGGGCGAGTGCGGACCAACACGGAGTCGGACGCGGACTCGGACCGGTTCCGGTGGTCGTACCGGCGGACAGGGAGTTCGAGCTCGACGACGACTCGGACGTGGGGGAAGGAGATGGAGGCGCGGCTGAAGGGGATATCGAGCGGCGAGGGGACGCCGAACTCCGCGAGCGGCCGTCGAGCGGAGCCGTTGGTGCTGTTCGTCGAAGAGAACGAGCCGAAGGAGTGGGTTGCGCAGGTGGAGCCTGGCGTTTTGATTACGTTCGTGTCGTTGCCAGGTGGCGGTAATGATCTCAAACGCATACGATTCAGTCGAGAGATGTTCAATAAATGGCAAGCACAAAGGTGGTGGGCAGACAACTACGACAAAGTTATGGAGCTTTACAATGTTCAAAGGTTTAGCCGCCAAGCATTCCCTCTTCCGACGCCACCAAGATCTGAAGATGAGAGCACAAAGCTTGAGTCAGCAGAAGCCAGTCCTGTAACTCCTCCACTGACCAGGGAACGGTTACCTCGTAATATTTACCGACCAACAGGGATGGGAATGGGATACTCATCCTCAGATTCCTTTGATCATCAGTCAATGCAATCCCGGCATTTCTACGACTCAAATGGTTTGAACTCTACCCCAAAAGTGTCCACTATTAGTGCGGCCAAGACGGAGATATCATCAATGGATGCTTCTATCAGAAGTAGCTCATCCAGAGAGGCTGATCGCTCGGGTGATTTATCAATCAGCAATGCTAGTGATTTGGAGACTGAGTGGGTTGAACAGGATGAACCTGGGGTTTACATTACAATCAGAGCATTGCCAGGTGGCGCAAGGGAGCTCAAACGAGTCAGGTTCAGCCGAGAAAAATTTGGAGAGATGCATGCTAGATTATGGTGGGAGGAGAACCGTGCCAGAATACATGAACAATACTTGTGA 1098 0.5291 MLTCIARPKKPDESDPNSGTSAAKSQAIKSLTSQIRDMALKASGAYKHCAPCTGPAAQGRVRTNTESDADSDRFRWSYRRTGSSSSTTTRTWGKEMEARLKGISSGEGTPNSASGRRAEPLVLFVEENEPKEWVAQVEPGVLITFVSLPGGGNDLKRIRFSREMFNKWQAQRWWADNYDKVMELYNVQRFSRQAFPLPTPPRSEDESTKLESAEASPVTPPLTRERLPRNIYRPTGMGMGYSSSDSFDHQSMQSRHFYDSNGLNSTPKVSTISAAKTEISSMDASIRSSSSREADRSGDLSISNASDLETEWVEQDEPGVYITIRALPGGARELKRVRFSREKFGEMHARLWWEENRARIHEQYL* 366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1377 365 MobiDBLite consensus disorder prediction 1 30 - -
Pvu3g1377 365 Pfam Transcription factor regulating root and shoot growth via Pin3 309 364 IPR013591 -
Pvu3g1377 365 Pfam Transcription factor regulating root and shoot growth via Pin3 131 185 IPR013591 -
Pvu3g1377 365 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 365 IPR044532 -
Pvu3g1377 365 PANTHER PROTEIN BREVIS RADIX-LIKE 4 1 365 - -
Pvu3g1377 365 MobiDBLite consensus disorder prediction 196 226 - -
Pvu3g1377 365 MobiDBLite consensus disorder prediction 51 70 - -
Pvu3g1377 365 ProSiteProfiles BRX domain profile. 131 186 IPR013591 -
Pvu3g1377 365 MobiDBLite consensus disorder prediction 15 30 - -
Pvu3g1377 365 ProSiteProfiles BRX domain profile. 310 365 IPR013591 -
Pvu3g1377 365 Pfam Transcription factor BRX N-terminal domain 20 52 IPR027988 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1377 Pvu-Chr3 32363578 32369654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1377 1 365 Major Intrinsic Protein MIP AT1G31880 44.216 7.45e-91 275
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1377 - - gmx:100794109 670.618
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1377 3 32363578 32369654 Pvu3g1377 3 32363578 32369654 ECH
Pvu3g1377 3 32363578 32369654 Pvu9g2368 9 33845161 33851491 PCT