Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1359 ATGAGAAGGAAGAAGCAGAAAAAGAAAGAAGAAAGGTTGATTTGGGAAAGAAAACGAGATTGGTTTCTATTTCTTCTTCTTCCAATTCAAGACACAAACCACTTTCTTCTTCTTTACAGACAAACAATCATGCCTTCTATTTCTTCCACAATTCACGTCCCACACTTCCACAATTCCGGTTCTTCCAAATGGCCAAGAATCGCGCTTTCTCTTCCCATGACTACGGATTTTGATTTCTTGATCCCCAAGAAGAAGAAGGAAGTTTCGGTGCAACTTTCAACTCTAAAGCCACCTGTCTCCCGACGGGAAACTGTGAGGTTCTGCAATTTCAACCTTGGGCGCTTCCAGCCTTCGCCTCATGAAATGGAACCCCATGACAGATTTGAGTTTGGCGATTTCATTGCACGAGAGGCCTTTCTTGACGAAGAGTATTGGATAGCAGCGTGGCTAAGGGCAGAAAATGAGTGGGAAGATCGAACAGAACGCTATCACACTGACACCGAATTTGCCCATTACAGAAAGAAGATCTATGCTAGAAAGGAGTTTGCTAAGATAAAGAAGCGGTGCAAGGAGCCACAACACGGCCACAGCTACACATGCATCATCACGGAGATGAAACCGGAGAAAGGTAAAAAACGCATAGTAATAAGAAGTGTTGTAGGAACCCTTGATCTGAATATCCGATATTTGCTGCTAGGGGAGACCTTTCCTGGGGAACTGGTTGATGCTCCACGTTTTTCTAAAGTCAACCGAACACCAACAAGCAGATATGGTTATATTGCAAACTTATGTGTTTCCAAACCATATCGCCGCAAGGCTATTGCAAGCAACATGGTGTCTTTTACTGTGGAATATGCAAAATCTAGAGGTGTGGAACGTCTTTATGTGCATGTGGACGCAAACAATGACCCTGCAGTGGCATTGTACCAAAAGTTGGGGTTTGAGGTAGTTGAAAACCCCTTGTTGATAAAAAGTCCTTATGACTTGCTTCGCTTACAGATGTAA 1005 0.4338 MRRKKQKKKEERLIWERKRDWFLFLLLPIQDTNHFLLLYRQTIMPSISSTIHVPHFHNSGSSKWPRIALSLPMTTDFDFLIPKKKKEVSVQLSTLKPPVSRRETVRFCNFNLGRFQPSPHEMEPHDRFEFGDFIAREAFLDEEYWIAAWLRAENEWEDRTERYHTDTEFAHYRKKIYARKEFAKIKKRCKEPQHGHSYTCIITEMKPEKGKKRIVIRSVVGTLDLNIRYLLLGETFPGELVDAPRFSKVNRTPTSRYGYIANLCVSKPYRRKAIASNMVSFTVEYAKSRGVERLYVHVDANNDPAVALYQKLGFEVVENPLLIKSPYDLLRLQM* 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1359 334 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 170 334 IPR000182 GO:0016407
Pvu3g1359 334 Gene3D - 134 321 - -
Pvu3g1359 334 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 219 318 IPR016181 -
Pvu3g1359 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 76 320 - -
Pvu3g1359 334 CDD NAT_SF 251 297 - -
Pvu3g1359 334 Pfam Acetyltransferase (GNAT) family 219 314 IPR000182 GO:0016407
Pvu3g1359 334 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 76 320 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1359 Pvu-Chr3 32067534 32071164 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu3g1359 Acetyltransf_1 3.4e-14 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1359 - - pvu:PHAVU_003G131100g 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1359 3 32067534 32071164 Pvu3g1359 3 32067534 32071164 ECH
Pvu3g1359 3 32067534 32071164 Pvu9g2351 9 33625112 33628257 PCT