Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1352 ATGACAATCGCATGGGGATCCATCTTCTCCATTTGTTTCAAGAGTGATTCTGTCTCTCTTTCTCCCAAGCCCACCAAAGAGGTGGCTACAAAGGGTTCTTCTTCCAACAGGGTCTCCATAATGGACTTGAGTTTTCCCGGCTCAACGCTGTCGGAGGATCTCTCCGTTTCTTTAGTGGGGTCAAACCTCCATGTTTTTTCACTCGCCGAGCTCAAGATCATCACGCAGAGTTTCTCTTCGAGTAACTTTCTGGGAGAAGGAGGTTTTGGACCTGTGCATAAGGGCTTCATTGATGACAAGCTTAGGCCTGGCCTCGAGGCTCAACCGGTGGCCGTCAAGCTCTTGGACTTGGACGGTTCTCAGGGGCACCGAGAGTGGTTGACTGAAGTTGTGTTTCTGGGTCAACTAAGGCATCAACATCTGGTGAAGTTGATTGGATATTGCTGTGAAGAAGAACACAGGCTTCTGGTGTATGAATATCTACCACGAGGCAGCTTAGAGAATCAACTATTTAGAAGATTTACGGCGTCGTTAACATGGTCAACAAGAATGAAAATTGCTGCTGGAGCAGCAAAGGGTCTAGCCTTTCTACATGAAGCAAAAAAACCAGTCATCTATAGAGATTTCAAAGCTTCAAACATATTGTTAGACTCTGATTATGATGCAAAGCTTTCTGATTTTGGCTTGGCAAAAGATGGTCCCGAAGGAGATGACACACACGTTTCAACTAGAGTGATGGGCACACAAGGGTACGCGGCCCCAGAATACATCATGACAGGACACTTGACAGCAATGAGTGATGTATACAGTTTTGGAGTTGTTCTCTTGGAGATTCTAACAGGAAGAAGATCAGTTGACAAAGGGCGCCCGCCAAGAGAACAAAATCTGGTGGAATGGGCCAGGCCTGTTTTGAATGATCCCCGGAAACTTAGCCGAATAATGGATCCAAGACTCGAGGGACAGTATTCTGAGGAAGGGGCAAGAAAAGCAGCTGCATTGGCTTACCAATGTCTCAGCCACAGGCCAAGAAATAGACCCTTGATGAGCACTGTGGTTAGTGTTCTTGAGCCTCTTAAGGACTTTGATGATGTTCCAATTGGACCCTTTGTTTACACTGTTCCCACTGATCACAATGAAATGGCAAAAGAGGTTGAAACACCCAAGGAGAGAAAGAGGGAAAATGGTCATCATCATCACAGGAATCATCATCACAATAGTCATAAACATCATGATCACGATGAGGCCAATAAAGATGCAAATGGTCACCACCACAACCACCGAAATCGTCGCCACAATGGGCATAGGCCTCATCCACTTAAATCGCCCAAGACACCAATTTCATCATCGGAGTCACAGAGCAATGAACACCGAAATGGTAGAAGAAGTGGGTCAAACTCACCTGACACCTCCATTGCATCAGAAACACAAGGAAGCATGGGTTAG 1443 0.4602 MTIAWGSIFSICFKSDSVSLSPKPTKEVATKGSSSNRVSIMDLSFPGSTLSEDLSVSLVGSNLHVFSLAELKIITQSFSSSNFLGEGGFGPVHKGFIDDKLRPGLEAQPVAVKLLDLDGSQGHREWLTEVVFLGQLRHQHLVKLIGYCCEEEHRLLVYEYLPRGSLENQLFRRFTASLTWSTRMKIAAGAAKGLAFLHEAKKPVIYRDFKASNILLDSDYDAKLSDFGLAKDGPEGDDTHVSTRVMGTQGYAAPEYIMTGHLTAMSDVYSFGVVLLEILTGRRSVDKGRPPREQNLVEWARPVLNDPRKLSRIMDPRLEGQYSEEGARKAAALAYQCLSHRPRNRPLMSTVVSVLEPLKDFDDVPIGPFVYTVPTDHNEMAKEVETPKERKRENGHHHHRNHHHNSHKHHDHDEANKDANGHHHNHRNRRHNGHRPHPLKSPKTPISSSESQSNEHRNGRRSGSNSPDTSIASETQGSMG* 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1352 480 MobiDBLite consensus disorder prediction 378 392 - -
Pvu3g1352 480 ProSiteProfiles Protein kinase domain profile. 78 370 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1352 480 SUPERFAMILY Protein kinase-like (PK-like) 53 356 IPR011009 -
Pvu3g1352 480 Pfam Protein tyrosine and serine/threonine kinase 82 354 IPR001245 GO:0004672|GO:0006468
Pvu3g1352 480 MobiDBLite consensus disorder prediction 377 480 - -
Pvu3g1352 480 Gene3D Transferase(Phosphotransferase) domain 1 161 364 - -
Pvu3g1352 480 MobiDBLite consensus disorder prediction 422 438 - -
Pvu3g1352 480 MobiDBLite consensus disorder prediction 442 480 - -
Pvu3g1352 480 CDD STKc_IRAK 84 358 - -
Pvu3g1352 480 Gene3D Phosphorylase Kinase; domain 1 47 160 - -
Pvu3g1352 480 PANTHER OS01G0588500 PROTEIN-RELATED 24 409 - -
Pvu3g1352 480 MobiDBLite consensus disorder prediction 393 407 - -
Pvu3g1352 480 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 24 409 - -
Pvu3g1352 480 ProSitePatterns Serine/Threonine protein kinases active-site signature. 204 216 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1352 Pvu-Chr3 31974081 31976785 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1352 64 355 Glycoside Hydrolase AT3G07070 53.898 1.38e-102 311
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Pvu3g1352 PK_Tyr_Ser-Thr 2.4e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1352 - - gmx:100799411 789.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1352 3 31974081 31976785 Pvu9g2347 9 33585922 33587703 PCT