Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1348 ATGGCAATTTCAGGGTCAGAGACTCAGAATTCATCCTCACTGAAAATTGCGTCTCAGGTGGAAGTGGAGTGTGTGAAATGCGACTCGTGCGGCTTCACAGAGGAATGCACCCCTGCGTACATCTCCAGGGTGCGTCAGAGGTACCAGGGCCGGTGGCTCTGTGGGCTGTGTGTGGAGGCTGTGAAACACGAGGTGGTGAGATCAGATAGAGTCATCACCACCGAAGAAGCCCTGGACCGCCACATCACCTTCTGCAGAGAGTTCCGATCATCCACCGTTCTCAATAAAACAGAGCACCCCATCTTCGCCATGGGACGCCTCCTCCGCCGGAGCCTCGATTCTCCCAAGCCTCTCCGATCGAACTCCAGTGGAGCTCTCGGGGTTCGAGCTCCACAATTGATTCGATCGGAAAGTTGCTTCTCTTCTATCTCCGGTTAA 438 0.5479 MAISGSETQNSSSLKIASQVEVECVKCDSCGFTEECTPAYISRVRQRYQGRWLCGLCVEAVKHEVVRSDRVITTEEALDRHITFCREFRSSTVLNKTEHPIFAMGRLLRRSLDSPKPLRSNSSGALGVRAPQLIRSESCFSSISG* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1348 145 PANTHER OS01G0745000 PROTEIN 1 144 IPR012876 -
Pvu3g1348 145 PANTHER DUF1677 FAMILY PROTEIN 1 144 - -
Pvu3g1348 145 Pfam Protein of unknown function (DUF1677) 22 110 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1348 Pvu-Chr3 31862468 31863669 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1348 - - gmx:100797385 251.521
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1348 3 31862468 31863669 Pvu9g0857 9 13222718 13224178 ECH
Pvu3g1348 3 31862468 31863669 Pvu1g0455 1 4721148 4722442 ECH
Pvu3g1348 3 31862468 31863669 Pvu3g1348 3 31862468 31863669 ECH