Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1345 ATGGCGAATCACGATGATTTTACGTATGATGTTTTTATGAGTTTCAAGGGCGTAAACGGTACTCGCTACGCATTCACCGATCATCTCTACCGAGCTTTGCTTCGTCACGGAATCAACGCCTTCAGAGACGATCAGAGTCTCCGGAGCGGGGACGAAATCCGTCCTGCTCTTCTTCAGGCAATCGAAGCTTCCAGAATATCTTTGGTCGTGCTCTGTCAAAACTATGCATCTTCCTCTTGGTGTCTTGACGAACTGGTCAAGATCATTCACTGTTACGAAAACAAAGGAAAACATGTCGTAGCAACTTTTTATTTGGTGGAACCTTCGGATGTACGGTACCAGAAAAACAGTTACGCAACTGCCATGAGTAAACATGAAAACAGATATGGAAAAGAGTCGGAGAAGGTTAAAGCATGGCGATCAGCTTTGTCCAGAGTTTGCGACCTAACCGGAATACACTACAGGAACCATATGTATGAAACCGAGGTTATTGAGAAGATTGTGAAAGACACCTCAGCTAAACTACCTCCCATGCCTTTACAAATCAAGCACCTAGTTGGATTTGATTCTCGTTTTCAACGGGTGAAATCTCTAATAGATGTTGAATCTAATGATGCCGTTTGCATAATGGGGATCTATGGGGTTGGAGGAATTGGCAAAACCACATTTGCTGTGGATCTGTATAACAGGATCAGGCATCATTTTGAAGCTGCAAGTTTTCTTGCTAATGTCAGAGAAAAATCAAATAAAAGCATTAAAGGCCTGGAAGATCTCCAAAGGACACTTCTGTCTGAGATGGGTGAAGAGACAGAAACCATTATTGGCAGTACATTTAAAGGAAGTTCTGAAATAAAGTGCAGGCTTGGACATAAAAGAGTTCTTCTGGTTGTGGATGATGTTGATTCTGTAAAGCAATTGGAAGCATTAGCTGGAGGATATGATTGGTTTGGTCCTGGTAGCAGGATCATTATAACAACAAGAGATAAAGATGTTCTACATGAGCATGATGTTGAAATTAAAAGATATGAAATGGAAGAGCTAAATTATCTTGAATCCCTTGAACTCTTTTGTTGGTATGCCTTTAATAGGAGCAGACCAGCAGAAAACTTTGCAAGCATCTCTACTCGTGCAGTAAGATACGCAAAGGGTATTCCGTTGGCACTAAGAGTAATAGGCTCCAATTTGAAGGGTAGGGGTCCTGAAGAATGGGAGACTGAATTACAGAAATATAGGAAGGTTCCAGATGTGGAGATTCAAGGTGTACTGGAAATAAGCTACACAAGCCTATCAGACTTGGACCAGAAAATTTTCCTGGACATTGCATGTTTCTTCAAAGGGGAAAGGTGGGATTATGTTAAAAGGATACTAGATGCTTGTGATTTCCACCCGGATATACAAGTATTTGTTAGTAAAGGTCTCTTAACTATTGATGAAAACGGTTGCCTGGAAATGCATGATCTAATACAAGACATGGGTAGAGAGATTGTTCGGAAGGAATCGCCATCAAACCCTGGTTACCGCAGCAGACTATGGTCTCTGAAAGAAGTTCATGAAGTACTTAAAGAAAATTCTGGAAGTGATACAGTTGAAGGAATAATGCTTCATCCCCCAAAACAAGAAAAAATTGATTATTGGACTGTGACAGCCTTCAAGAAGATGAGGAACCTCAGAATTTTGATTGTTCGCAATACAATATTTTCGTCTGGTCCTAGTTATCTGCCAAATAGTTTACGGCTAATCGATTGGAAGGGGTACCCATCAAACTGTTTTCCGCCAGACTTTCATCCCCACAGAATTGTTGACTTCAAGTTACCTCATAGTTCTCTGATATTTAAAAAACCATTTCTGAGATTTGAGGATTTGACATTCATCAATCTTTCCCATTGTCAATTCATAACTCAAATTCCTGACCTGTCTGGAGCTAAAAGCTTGAAGGTATTTACACTTGATAAATGCTATAAACTGGTAAGGTTCGATAAATCCATTGGATTTATGCCTAACCTTGTCTATTTAAGTGCTTCAGAATGCACTCTGCTCACAAGTTTTGTGCCAAAAATGTATTTGCCCTCTCTCGAAGTGCTTTCATTTAACTTTTGCAGAAGACTTGAACACTTCCCACATGTAACGCAAAAAATGGATAAGCCATTAAAGATATACATGATGAGTACTGCCATTAAAAAGATTCCGAATTCCATTGGTAACCTTACTGGACTTGAGCATATAGACATGTCAGTTTGCAAAGAGCTTAAATATCTGCCAAGTAGCTTCTTTTTGCTTCCAAAACTTGTCACTTTAAAAGTTAATGAATGCTCTAAACTTGGAGAATCATTTCAAAGGTTCCAAGAGAGCCGCCATTCAGTGGCAAATGGCAGTCCAGATTTAGTGGCACTTCATTTTTGTGAGACTAATCCATCATATGAAGATCTTTGTGCCATTCTTGAAATTTTCCCAAAACTGGAAGAAGTAAATGTATCACACAACGGATTTGTAGCCCTACCAAACAGCATAAGAGGATCTTCTCACTTGAAAAGTCTTGATGTGAGTTTCTGCAGAAATCTTAAGGAAATTCCAGAACTTCCCTTAAGTGTTCAGAAAGTGGATGCAAGATACTGTCAGTCCTTAACTTCAGAGGGATCAAGAATGCTATTGTCTAAGGTCTCAGAAGAGATCCAAAGAATACAAGTTGTAATGCCGATGCTGAAAAGGGAAATCCCTGAATGGTTTGACTGCATTGGCACTATAGAGATTCCACATTTCTGGGCTCGCAGAAAGTTTCCCGTTGTTGCTTTAGCATTAGTTTTCCAGGAATCGAGAAAGAGACTTTCTGATTTTGAAGATGCTTTCCAGACAGCTTTAGAATCGTTCACTGGATTTGTGAAGTGGCACACTGTTAGCCTCCACTTGTTTATTGACGGACAAGAAATATGTGGTAGAGATTACCACTATTTCAACGTTGGAGAAGATCATGTGTTATTTTGTGATCTCCGAGTCTTGTTCAGGGATGAAGAGTGGCAGAGCCTCGACGCAAGTCTTGGAGATGATTGGAAGGCCATTCAGGTTCAATACGAATCAGACCTGATTCTGTGTCATTGGGGAGTTAATGTGTACGAGCAAGAAACAAACATGGATGATATCCAGTTCAGGTTTCCCACTTCCAGCTCCACTAGGAACTACACCCCATCATCACTTTTGGTTCCAAAAGGCTCTCCAAAGCAGAAAATGAAGCATATGCTGGAAAGTTTTGATCTACGAGACATGTTTAACAAGAATCTGTCTCTAATAGAGTCAGAAGAAGTTCCAAACAGGCATGGAAAAGTACTTTTGAGGACCTGGAGGAATGCTAAGGCTGAGATTAGTGAGGAAGCTTCAATTTCAATCTACGGGGCAAGTTTAAAGCAAGAACACGAAGAATCTGTAGAGGATGTGGTACAGGTTTTAGAGATGATAAAGGAGAATGTACCCAAACATTTTTCTGATTCAAACCCTGAAGAAATGCAATTGTTTGGTGGATTTGTGGAAAGATTGTTGAGGGCACGGGTAGAAGTAATGAAGGAAAACGGGTTGGACATGGGTATGCCTATTCTTCTAGAGTACACTGAAGCAGGAGGATCTAAATGTCGACGCTTTTGGGGAGTGTTGGAGTTAAAAGTGGGAGATCCATTTTACAAAGCAGTGTTGAGGAAGTATAACCACCTTTCATGGGAATTTTCGACCAGCAACGAAGCCTCCAACTCAGAGTCATGGTTTGAAAACTTGAGGATAACCATTGTTTTGTTGAAATGCTTGGGTCCAGCCATGGAGGAAGCTTCAAGCTTTGGCTATGAGGAATCCTTGGAGGAAGGATACTACGATCCTGAACTGGAAGAGTTAATGATGAGGATTGAGCAAGATGCTATGGGGTTTAATAAATCTTACGGCAAAATGAAGGCATCTATTGTTCAAACCGATGAGTCAATTTCTCCAAAGTATTTGTTTGAGACATTAATCTTCAGGAGACTAATAGCTTTGGGAAAATTGTCAATGTTTGGATCTGCAGCCAAGTTCAAGATAACACCTTATGGGAATATAAGGGTTGAGGACGATCCTTTCCGCACTCTGAAGACATGCTTCTGGAGATACCAGTAA 4125 0.4039 MANHDDFTYDVFMSFKGVNGTRYAFTDHLYRALLRHGINAFRDDQSLRSGDEIRPALLQAIEASRISLVVLCQNYASSSWCLDELVKIIHCYENKGKHVVATFYLVEPSDVRYQKNSYATAMSKHENRYGKESEKVKAWRSALSRVCDLTGIHYRNHMYETEVIEKIVKDTSAKLPPMPLQIKHLVGFDSRFQRVKSLIDVESNDAVCIMGIYGVGGIGKTTFAVDLYNRIRHHFEAASFLANVREKSNKSIKGLEDLQRTLLSEMGEETETIIGSTFKGSSEIKCRLGHKRVLLVVDDVDSVKQLEALAGGYDWFGPGSRIIITTRDKDVLHEHDVEIKRYEMEELNYLESLELFCWYAFNRSRPAENFASISTRAVRYAKGIPLALRVIGSNLKGRGPEEWETELQKYRKVPDVEIQGVLEISYTSLSDLDQKIFLDIACFFKGERWDYVKRILDACDFHPDIQVFVSKGLLTIDENGCLEMHDLIQDMGREIVRKESPSNPGYRSRLWSLKEVHEVLKENSGSDTVEGIMLHPPKQEKIDYWTVTAFKKMRNLRILIVRNTIFSSGPSYLPNSLRLIDWKGYPSNCFPPDFHPHRIVDFKLPHSSLIFKKPFLRFEDLTFINLSHCQFITQIPDLSGAKSLKVFTLDKCYKLVRFDKSIGFMPNLVYLSASECTLLTSFVPKMYLPSLEVLSFNFCRRLEHFPHVTQKMDKPLKIYMMSTAIKKIPNSIGNLTGLEHIDMSVCKELKYLPSSFFLLPKLVTLKVNECSKLGESFQRFQESRHSVANGSPDLVALHFCETNPSYEDLCAILEIFPKLEEVNVSHNGFVALPNSIRGSSHLKSLDVSFCRNLKEIPELPLSVQKVDARYCQSLTSEGSRMLLSKVSEEIQRIQVVMPMLKREIPEWFDCIGTIEIPHFWARRKFPVVALALVFQESRKRLSDFEDAFQTALESFTGFVKWHTVSLHLFIDGQEICGRDYHYFNVGEDHVLFCDLRVLFRDEEWQSLDASLGDDWKAIQVQYESDLILCHWGVNVYEQETNMDDIQFRFPTSSSTRNYTPSSLLVPKGSPKQKMKHMLESFDLRDMFNKNLSLIESEEVPNRHGKVLLRTWRNAKAEISEEASISIYGASLKQEHEESVEDVVQVLEMIKENVPKHFSDSNPEEMQLFGGFVERLLRARVEVMKENGLDMGMPILLEYTEAGGSKCRRFWGVLELKVGDPFYKAVLRKYNHLSWEFSTSNEASNSESWFENLRITIVLLKCLGPAMEEASSFGYEESLEEGYYDPELEELMMRIEQDAMGFNKSYGKMKASIVQTDESISPKYLFETLIFRRLIALGKLSMFGSAAKFKITPYGNIRVEDDPFRTLKTCFWRYQ* 1375
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1345 1374 ProSiteProfiles TIR domain profile. 7 175 IPR000157 GO:0007165
Pvu3g1345 1374 SMART till_3 8 149 IPR000157 GO:0007165
Pvu3g1345 1374 Gene3D - 175 342 IPR027417 -
Pvu3g1345 1374 Pfam TIR domain 9 181 IPR000157 GO:0007165
Pvu3g1345 1374 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 178 440 IPR027417 -
Pvu3g1345 1374 Gene3D - 347 430 IPR042197 -
Pvu3g1345 1374 Gene3D Ribonuclease Inhibitor 719 895 IPR032675 -
Pvu3g1345 1374 Gene3D Ribonuclease Inhibitor 541 718 IPR032675 -
Pvu3g1345 1374 SUPERFAMILY L domain-like 535 877 - -
Pvu3g1345 1374 Pfam NB-ARC domain 198 409 IPR002182 GO:0043531
Pvu3g1345 1374 Gene3D - 7 174 IPR035897 -
Pvu3g1345 1374 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 16 1107 IPR044974 GO:0006952
Pvu3g1345 1374 SUPERFAMILY Toll/Interleukin receptor TIR domain 4 151 IPR035897 -
Pvu3g1345 1374 PRINTS Disease resistance protein signature 209 224 - -
Pvu3g1345 1374 PRINTS Disease resistance protein signature 287 301 - -
Pvu3g1345 1374 PRINTS Disease resistance protein signature 381 395 - -
Pvu3g1345 1374 PRINTS Disease resistance protein signature 733 749 - -
Pvu3g1345 1374 SUPERFAMILY "Winged helix" DNA-binding domain 417 521 IPR036390 -
Pvu3g1345 1374 Coils Coil 1132 1152 - -
Pvu3g1345 1374 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 16 1107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1345 Pvu-Chr3 31823207 31828985 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1345 9 783 WRKY Transcription Factor Family AT4G12020 30.730 1.14e-89 320
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1345 - - mtr:MTR_4g023040 1830.45