Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1342 ATGGCCGCTGTTCACCTCTTCTTCTTCCTCCTCCTCCTCTCCCTCCTCCCTCTCTCCCTCCCCCTCACTGATAACCAAGCCCTCCTCGCCCTCAAAAAATCCTTCTCCAACCCCCAAACCCTCCCCTCCTGGATCCCCGACCAGAACCCTTGCTCCGCCCGCTGGGTCGGCGTCATCTGCCTCAATAATGGCATCAGCAGCATCCATCTCACCGACCTCTCCCTCTCCGGCTCCATCGATATCGAAGCCCTCTCCCAAATCCCCTCTCTCCGCTCCATCAGTTTCGTCAACAACTCCTTCTCCGGTCCCATCCCTCCCTTCAACAAACTCGGAGTCCTCAAGGCCCTCTACTTGACCAACAACCAGTTCTCTGGACCCATCCCCTCCGACTTCTTCTCCCAGTTAGCCTCCTTGAAGAAAATATGGCTCTCCTACAACAAATTCACTGGCCCCATCCCCGAATCCATAACCAACCTCCGTTTCTTATCCGAGCTCCATCTCGAAAACAACCAGTTCTCCGGCCGCGTCCCCGAACTCAAACAGGACATCAAATCCCTCGACATGTCCCACAACAACCTCCAAGGCCAAATCCCCTCCTCCATGTCGCGCTTCGACCCCAAATCCTTCTCCGAAAACAAAGAACTCTGCGGGAAGCCACTGGCTATAGAGTGCGAATCCGAGCCAAAGGCCAGTGAAAGCACTGGTTGGGGATTGAAGGTGGTTATTCTCATCTTCATTGCCGCTGTTCTCGCAGGGGCTTTTGTCATTATGCGATCCAAGCGTCAACGCGACGACGACTTCAGCGTGATGAGCAGGGATAACGCGGAGGAGGTGGTGCAGGTGCACGTGCCAAGCACCAACCACAGCAGGGGAACCTCCGAGGGAAGCAAGAAGGAGTCTTCCACGACATCGAAGAAAGGGGGCTCGCGCAGTATTGGCGACCTCGTGATGGTTAACGATGAGAGGGGCACATTTGGCTTGCCCGATTTGATGAAGGCTGCGGCGGAGGTTCTCGGAAACGGTGGGCTGGGTTCGGCGTACAAAGCCGCCATGGCTAGTGGGTTGTCTGTGGTGGTAAAGCGGATGCGAGAGATGAATAAAGTGAGCAGAGACATCTTCGACGCCGAAATGAGACGCTTTGGGAGACTCAGAAACCCTAACATCTTGACCCCTCTCGCTTACCATTACCGCAAGGAGGAAAAGCTGTTCGTCACAGAATACATGCCCAAAGGAAGCTTGCTATACGTCTTGCACGGTGACAGAGGATCGAATCATTCGGACCTGAACTGGCCAATCCGTTTGAAAATTGTGAAGGGAATAGCACGAGGGTTAGGGTTTCTATACAAAGAATTTCCTAACGAAGACCTGCCACATGGAAACTTGAAATCCAGCAATGTTTTGCTAGCTGAAAACTACGAGCCTCTCCTGGGCGATTTCGCCTTTCATCCACTCATCAACCACAACTACGCCGTACAGACAATGTTTGCCTACAAAACTCCGGATTACGTATCATACCAGCGTGTTACACAGAAAACCGACGTTTATTGCCTCGGAATCATCGTTCTTGAGATCATCACCGGGAAATTCCCTTCTCAGTATCACAGTAATGGGAAGGGTGGCACTGACGTAGTGCAGTGGGTGTTCACTGCAATCTCTGACAGAAGAGAGGCCGAGTTGATTGATCCAGAGTTGAAGAGCAGTCACTCTAACTCCCTCAATCAAATGCTGCAACTTCTCCAAATAGGGGCTGCTTGCACGGAGAGCAACCCCGACCAACGACTTAACATGAAGGAAGCCATTAGGAGGATAGAGGAGGTTCAGGTTTAA 1827 0.5249 MAAVHLFFFLLLLSLLPLSLPLTDNQALLALKKSFSNPQTLPSWIPDQNPCSARWVGVICLNNGISSIHLTDLSLSGSIDIEALSQIPSLRSISFVNNSFSGPIPPFNKLGVLKALYLTNNQFSGPIPSDFFSQLASLKKIWLSYNKFTGPIPESITNLRFLSELHLENNQFSGRVPELKQDIKSLDMSHNNLQGQIPSSMSRFDPKSFSENKELCGKPLAIECESEPKASESTGWGLKVVILIFIAAVLAGAFVIMRSKRQRDDDFSVMSRDNAEEVVQVHVPSTNHSRGTSEGSKKESSTTSKKGGSRSIGDLVMVNDERGTFGLPDLMKAAAEVLGNGGLGSAYKAAMASGLSVVVKRMREMNKVSRDIFDAEMRRFGRLRNPNILTPLAYHYRKEEKLFVTEYMPKGSLLYVLHGDRGSNHSDLNWPIRLKIVKGIARGLGFLYKEFPNEDLPHGNLKSSNVLLAENYEPLLGDFAFHPLINHNYAVQTMFAYKTPDYVSYQRVTQKTDVYCLGIIVLEIITGKFPSQYHSNGKGGTDVVQWVFTAISDRREAELIDPELKSSHSNSLNQMLQLLQIGAACTESNPDQRLNMKEAIRRIEEVQV* 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1342 608 PANTHER LRR RECEPTOR-LIKE KINASE 5 608 - -
Pvu3g1342 608 SUPERFAMILY Protein kinase-like (PK-like) 336 603 IPR011009 -
Pvu3g1342 608 Gene3D Transferase(Phosphotransferase) domain 1 408 608 - -
Pvu3g1342 608 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 5 608 - -
Pvu3g1342 608 Gene3D Ribonuclease Inhibitor 22 180 IPR032675 -
Pvu3g1342 608 Gene3D Ribonuclease Inhibitor 181 223 IPR032675 -
Pvu3g1342 608 Pfam Protein kinase domain 336 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1342 608 MobiDBLite consensus disorder prediction 279 313 - -
Pvu3g1342 608 SUPERFAMILY L domain-like 23 204 - -
Pvu3g1342 608 ProSiteProfiles Protein kinase domain profile. 332 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1342 608 Gene3D Phosphorylase Kinase; domain 1 298 407 - -
Pvu3g1342 608 Pfam Leucine rich repeat N-terminal domain 23 60 IPR013210 -
Pvu3g1342 608 Pfam Leucine rich repeat 113 172 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1342 Pvu-Chr3 31751893 31754571 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1342 2 608 Receptor kinase-like Gene Family AT3G42880 50.236 0.0 628
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pvu3g1342 Pkinase 1.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1342 - - gmx:100788667 956.436
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1342 3 31751893 31754571 Pvu9g2332 9 33425886 33428520 PCT