Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1333 ATGCAAACGCAGCCAATTTCCACTATCGCCTTCACGGTCTTCCTCCTCCTGTTCTCTCCACCACGCGCCGCCGCGGTAAGGCCACCACCAAATCCACTTCGTTCATCGTGCGCGCAGGCCAGGTACCCCGTTCTCTGCTTCCAAACCCTCTCCAACTTTTCCAACCCCACCGCCAAACCCCTCGACCTGGCCCAGGCCGCCGTCAGGGCGAGCCTGGTCCGTACGCGCGCTCTCTCCGCCTACCTCGGGACGCTAAAGGCCGCGTCGCAGGGTTTCGGACCGAGGCAGCGAATTGCGGTGAGTGACTGCGTGCAGCAGATATCCGACTCGGTGAGTGAGTTGAGCAAGACGCTGAACGAGTTGCAGCATCTCCGCGACGGAACCTTCCAGTGGCAGATGAGCAACGTCCAGACCTGGACCAGCACCGCCCTCACCAACGGCGATACCTGCATCTCCGGCTTTAACGCTGCCGCCACCACCGGGAATGTCAAGTTGGAGCTCAAGCAAAGAGTCACCGACGTCGCCATGCTCACCAGCAACGCGCTTTACCTCATCAATCGTCTCGCTGATAGCGTCACAGGGAAGTCTCGCTCCAATTCCGGAAACTGA 609 0.6043 MQTQPISTIAFTVFLLLFSPPRAAAVRPPPNPLRSSCAQARYPVLCFQTLSNFSNPTAKPLDLAQAAVRASLVRTRALSAYLGTLKAASQGFGPRQRIAVSDCVQQISDSVSELSKTLNELQHLRDGTFQWQMSNVQTWTSTALTNGDTCISGFNAAATTGNVKLELKQRVTDVAMLTSNALYLINRLADSVTGKSRSNSGN* 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1333 202 SMART PMEI_2 28 184 IPR006501 GO:0004857
Pvu3g1333 202 TIGRFAM PME_inhib: pectinesterase inhibitor domain 6 188 IPR006501 GO:0004857
Pvu3g1333 202 Coils Coil 104 124 - -
Pvu3g1333 202 PANTHER PLANT INVERTASE/PECTIN METHYLESTERASE INHIBITOR 7 197 - -
Pvu3g1333 202 PANTHER PECTINESTERASE INHIBITOR-LIKE 7 197 - -
Pvu3g1333 202 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 33 188 IPR035513 -
Pvu3g1333 202 Gene3D Invertase/pectin methylesterase inhibitor family protein 31 190 IPR035513 -
Pvu3g1333 202 CDD PMEI-like_3 35 189 - -
Pvu3g1333 202 Pfam Plant invertase/pectin methylesterase inhibitor 33 183 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1333 Pvu-Chr3 31501013 31501836 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1333 33 191 Carbohydrate Esterase AT3G14310 28.395 1.87e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1333 - - gmx:100810705 271.937
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1333 3 31501013 31501836 Pvu3g1333 3 31501013 31501836 ECH