Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1325 ATGGGTCACGTTGAAAGTGGCGCTACATTTTTTGCTGCAGTTACACTCGCACTCCACCTCGTCACAGCAACCACCAGTTTTCCTCCCAACTCTTCTTTAAACGTCGCCGATAAAGTCATTAGGGTTCGCGGGGACGGCTCGGGGGACTTCAGGACGGTGACGGAGGCCGTGAACAGCATTCCGTCAGGGAACAAGCGGCGAGTGGTGGTGTGGATCGGCATGGGCGAGTATCGCGAGAAGGTGACCGTGGATAGGTCCAAACCTTTCGTCACGTTTTATGGAGAGAGGAATGAGAGCGACTCCCACACCATGCCCATCATAACGTACCACGCCACCGCCTTAAAGTATGGGACAGTCGACAGCGCCACCGTCGCTGTCGACTCCGACTACTTCGTCGCTGTCAACGTCGCTTTTGTGAACTCGTCTCCAAGGCCGGATGAAAATAGTGTTGGAGCTCAAGCATTAGCCATGAGGATATCTGGGGACAAGGCTGCATTCTACAACTGCAAGTTCGTGAGCTTTCAGGACACTTTATGTGATGATAAAGGCAGGCATTTTTTCAAGGACTGTTACATCCAAGGCTCCTACGATTTCATCTTTGGAAATGGAAAATCCATCTACTTGAGAAGTAGAATAGAATCGGTGGCAAAGGGTTTGAGTGTTATTACAGCACAAGGTAGGGAAAGCATTGGAGAAGATACTGGATTCACTTTCCTGCACTGCAACATTACGGGAAGTGGTAACAGGAACACTTACCTTGGACGTGCATGGAGGAAGAGCCCTAGAGTGGTATTTGCTTACACCTACATGGCTTCCCTCATCAGAGCCCGGGGATGGTTCACCAATCAACTTTCTCAACCCAAATCCAACAACACAATCTACTATGGAGAATATAAGTGCACGGGAGCAGGAGCTGTTTCCTCTGGACGTGTAAAATTTCGGAAGATACTGTCTGATGAAGAAGCAAAGCCCTTCATGAGCATGGCGTATATTCATGGAGGAAAGTGGGTTGTCCCACCTCCAAAGCTGTGA 1032 0.4952 MGHVESGATFFAAVTLALHLVTATTSFPPNSSLNVADKVIRVRGDGSGDFRTVTEAVNSIPSGNKRRVVVWIGMGEYREKVTVDRSKPFVTFYGERNESDSHTMPIITYHATALKYGTVDSATVAVDSDYFVAVNVAFVNSSPRPDENSVGAQALAMRISGDKAAFYNCKFVSFQDTLCDDKGRHFFKDCYIQGSYDFIFGNGKSIYLRSRIESVAKGLSVITAQGRESIGEDTGFTFLHCNITGSGNRNTYLGRAWRKSPRVVFAYTYMASLIRARGWFTNQLSQPKSNNTIYYGEYKCTGAGAVSSGRVKFRKILSDEEAKPFMSMAYIHGGKWVVPPPKL* 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1325 343 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 37 342 - -
Pvu3g1325 343 SUPERFAMILY Pectin lyase-like 35 337 IPR011050 -
Pvu3g1325 343 PANTHER PECTINESTERASE 37 342 - -
Pvu3g1325 343 Pfam Pectinesterase 42 333 IPR000070 GO:0030599|GO:0042545
Pvu3g1325 343 Gene3D - 34 340 IPR012334 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1325 Pvu-Chr3 31190826 31193496 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1325 28 343 Carbohydrate Esterase AT5G07410 50.316 1.87e-119 347
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1325 K01051 - gmx:100790786 568.926