Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1319 ATGGCATCGTCAGAGAATGAACCTTGTCAGTCTCCTTCTGCCTCTGACCAAACCCTTCCTCCTCCTCCTCCTGCCAATGTCTGTATACAGAAATTTAGGCTATATGAGACTCGATCGAACTTTTACATGATAGGAAGGGACAAGAGCAGGACATACTGGAGAGTACTAAAGATTGACCGTCTAGATCCTTCTGAACTAAACTTACGTGAAGATTCCACCACATATACAGAAAGTGAATGTTCTGATCTTTTGAGACGGATACATGAGGGTAACAAGTCAACAGGTGGACTTAAATTTGTTACAACTTGTTACGGAATTGTAGGGTTCATCAAATTTTTGGGACCTTACTACATGGTGCTTATCACAAAAAGAAGGCAAATTGGTGCAATCTGTGGTCATACAGTATATGCTGTCTCGAAGAGTGAGATGATTCCATTGCCATATTCGTCAGTTCGACTTAACATCAATGATAAAAATGAAAACAGGTACAAGAGGCTCTTATGCATGGTCGACCTTACAAAGGACTTTTTTTTCAGCTACTCATATCACATCATGCGTAGTCTACAGAGGAACATCTGTGAGAATGAGACAGGCCATGTTCTTTATGAGACCATGTTTGTTTGGAATGAGTTCTTAACAAGGGGAATTAGGAATCACCTCCAAAATACTATTTGGACAGTTGCACTAGTTTATGGTTTTTTTAAACAGGATACACTCATGATATCTGGACGGGAGTTCATACTTACACTAATTGCAAGACGATCACGTCATTATGCTGGCACTAGGTATTTGAGGCGAGGTGTTAATGAGAAAGGCAGAGTAGCCAATGATGTTGAGACAGAACAAATGGTCTTTGAGGATGTTCCAGAAGGTTTTCCCATCCAAATAAGCTCTATCATCCAGAACCGTGGTTCAATCCCCCTTTTCTGGTCACAGGAAACTTCAAAACTAAATATCAAACCAGATATTATATTGTCTAAGAGGGATCAAAATTATAAAGCCACTAGACTTCACTTTGAAAACCTCGTCAAAAGATATGGGAATCCCATAATTATTTTGAATTTGATAAAGACCCATGAGAAGAAGCCTCGTGAGTCCATACTACGGGCAGAGTTTGCTAATGCTATAGATTTCATTAATAAAGATTTATCCGAGGAGAACAGGCTTAGGTTCCTTCATTGGGATCTGCACAAACATTTTCAGAGCAAAACTACAAATGTCTTGCAGCTTCTCGGTAAAGTGGCTGCATATGCATTGACGTTAACAGGCTTTTTCTATTGCCAAGCAGCACCGACATTGAGACTCGAAGAATCTCTAAATTGGCCGACTACAGAAAATGTTAAGGCAACCTATTCACCTACTAGACTAGTCAATGATGACAACGAGGATGCTAATAATTTAGAAAGGAAACCAAGTGAAGGAAACAATGATGTCATTGAAACTCATTCTACCAAACCTCCCAAGTTGCAGAAGGGGGTGCTCAGAACCAACTGCATTGACTGTTTGGATCGCACAAATGTTGCACAATATGCATATGGGTTGGCTGCTCTTGGCCACCAACTCCATGCTGTGGGTGTTATTGACCACCCAAAAATTGATCTTGATGATCCTGTAGCTGATGATTTAATGGGTTTTTATGAGCGGATGGGTGATACTCTTGCTCATCAGTATGGTGGTTCGGCAGCGCACAATAAGATTTTCTCTGAGAGGAGGGGTCAGTGGAGAGCTGCAACACAGTCTCAAGAGTTTTTTAGGACTCTTCAGCGCTATTACAGCAATGCATACATGGATGCTATGAAACAGGATGCAATTAATGTATTTCTGGGGCATTTTCAGCCACAACAGGGTAAGCCTGCTCTATGGGAGTTGGATTCAGATCAGCTCTATGATACAGCAAGACATGGAGAGGATGATGCAAGGTCATTTATTAAAAGATCCTTCTCAGATGGGAACATTCTTACTGAAAGTTCTACACCAATGTCAGCCCCAAATGCCAGGCACGTAAAATTCCCAAGCCAATGCTTGTCAGATCGATTAGAAGATGGAGGCAAGGATCTTTGCGAGTCATCACCTGAAATATCTACTACTGAGAGTGACATCTCATTTTCAAGGTACACTCCTACAATGCCTCGAAGACATCTCTTTGGAGATATGCAAAGAGAGCGTTGTGTTGAAAGTGATCATATTTACTATTCTGATCATGGAGATTCCTTCAGCTGCTCCAACTTTGTTGATCTGGATTGGCTATCTTCTTCAGCAAACTCATGTGAAGAAGAGCCATTTGAGAGATTATCAATCACTAACTCTCCAATTGCTGGAGTTTCTTCCGAAAATGTTGTCAATGGAATAATGGTAGGAGAAACAACTGCCTCCACAAGTGATTGGGGAGCCTCTAGCCTAAAGGGAAGAGAGCAAACTGAATCCGAGTTATCGTATGCTAATTCACAATCCAACACAGCAGAGGAATTTCCAGATACTTTTGTACAATGGGTGACTTATGGACAGACACTTTGCCATTGA 2520 0.4111 MASSENEPCQSPSASDQTLPPPPPANVCIQKFRLYETRSNFYMIGRDKSRTYWRVLKIDRLDPSELNLREDSTTYTESECSDLLRRIHEGNKSTGGLKFVTTCYGIVGFIKFLGPYYMVLITKRRQIGAICGHTVYAVSKSEMIPLPYSSVRLNINDKNENRYKRLLCMVDLTKDFFFSYSYHIMRSLQRNICENETGHVLYETMFVWNEFLTRGIRNHLQNTIWTVALVYGFFKQDTLMISGREFILTLIARRSRHYAGTRYLRRGVNEKGRVANDVETEQMVFEDVPEGFPIQISSIIQNRGSIPLFWSQETSKLNIKPDIILSKRDQNYKATRLHFENLVKRYGNPIIILNLIKTHEKKPRESILRAEFANAIDFINKDLSEENRLRFLHWDLHKHFQSKTTNVLQLLGKVAAYALTLTGFFYCQAAPTLRLEESLNWPTTENVKATYSPTRLVNDDNEDANNLERKPSEGNNDVIETHSTKPPKLQKGVLRTNCIDCLDRTNVAQYAYGLAALGHQLHAVGVIDHPKIDLDDPVADDLMGFYERMGDTLAHQYGGSAAHNKIFSERRGQWRAATQSQEFFRTLQRYYSNAYMDAMKQDAINVFLGHFQPQQGKPALWELDSDQLYDTARHGEDDARSFIKRSFSDGNILTESSTPMSAPNARHVKFPSQCLSDRLEDGGKDLCESSPEISTTESDISFSRYTPTMPRRHLFGDMQRERCVESDHIYYSDHGDSFSCSNFVDLDWLSSSANSCEEEPFERLSITNSPIAGVSSENVVNGIMVGETTASTSDWGASSLKGREQTESELSYANSQSNTAEEFPDTFVQWVTYGQTLCH* 840
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1319 839 Pfam SacI homology domain 104 400 IPR002013 GO:0016791
Pvu3g1319 839 PANTHER PHOSPHOINOSITIDE PHOSPHATASE SAC3-RELATED 21 839 - -
Pvu3g1319 839 MobiDBLite consensus disorder prediction 455 485 - -
Pvu3g1319 839 ProSiteProfiles Sac phosphatase domain profile. 167 559 IPR002013 GO:0016791
Pvu3g1319 839 MobiDBLite consensus disorder prediction 461 476 - -
Pvu3g1319 839 PANTHER POLYPHOSPHOINOSITIDE PHOSPHATASE 21 839 IPR043573 GO:0043813|GO:0046856
Pvu3g1319 839 MobiDBLite consensus disorder prediction 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1319 Pvu-Chr3 30948239 30959535 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1319 28 839 Acyl Lipid Metabolism Gene Families AT5G20840 63.228 0.0 1028
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1319 K22913 - gmx:100810079 1555.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1319 3 30948239 30959535 Pvu9g0860 9 13249918 13268354 ECH
Pvu3g1319 3 30948239 30959535 Pvu3g1319 3 30948239 30959535 ECH
Pvu3g1319 3 30948239 30959535 Pvu9g2310 9 33091759 33110245 PCT