Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1314 ATGGCGTTTCAGGATTTTGACCTCATCTCAGAGCGGCGGAGAAACGAAAAGAAGCAAAAGATGAGGAAGAGGATCATGATCGGCGTGGTTTCTTCCATCGTCCTCGTTGGCATGATCGGTGCAGTTCTCTTCGTCGTGGTTAAGAATGATGACGCTGGCAATAACAAGAGCACTAACAACAAGTCACGTACTAGCCATTCACCACCACACTCAGAAGGTGGCTCGCCCAAGGAGCACGTGGCGCACTCGGAGAAGATTGTGCAAGTGGTGTGCAGCTCCGCTGATTTCAAGGACAGGTGTGAAGCCCCTCTGAACAAGGCCATGCAGGATGACCCCAAACTCTCCGAACCCAAAGACCTTCTGAAGATCTACGTGAAGCTCGCAGAGGAAGAGCTTTCCAAGGCCTTCAACAGCACCAAGTCGGTTAAGTTCGACAGTGAGGAAGAGAAAGGAGCGTTTGAGGATTGCCAGAAGCTGTTTGAGGATGCCAAGGATGACATCGCAACCTCTATCTCTGAACTTTCCAAAACTGAGCTCAAGAATATCTCTGACAAGACTCCCGATTTGAACAGCTGGCTCAGTGCTGTCATCTCCTTCCAACAGACCTGCATGGATGGCTTCCCTGAGGGAAACATCAAGACTGAACTTCACAATCTCATGAACGATTCCAAGGAATTCGTTAGCAACTCCCTTGCCATTCTCTCTCAGGTGGCATCGGCTCTTTCTACATTGCAAAACATTGACGCACCCTCACATGGCCGCTCCTTGCTATCTTCCAACTCCCCGGCTGCTACTCTCGACAAAACCGATGGCTTTCCCTCTTGGATCAACCAAGAGGACCGCAGGATCTTGAAGGCCGTCGATAACAAACCTGCACCTAATGTCACTGTGGCAAAAGATGGCAGCGGAAACTTCAAAACCATCTCTGAATGTTTGAATGCTGTCCCTCAAAACTATGAAGGACGGTATGTGATTTACGTTAAAGAAGGAATATACGACGAGCCAGTGATGATTACAAAGAATATGCAAAACATAACCATGTATGGTGATGGATCCCAAAAGACCATCGTGACTGGCAACAAAAACTTCAGGGACGGAGTCAGGGTTTTCCTCACTGCCAGTTTTGTGGTGGAGGGAGATGGATTCACAGGCATGGCAATGGGATTCAGAAACACCGCAGGCCCTGGTGGAAGTCAAGCAGTGGCCGCAAGAGTGCAGTCGGATCGTTCAGTGTTTGCGAACTGTCGGTTTGAGGGCTACCAAAGCACTCTATTCACCCAAGCCCACAGACAATTCTACAGGAGTTGCATCGTAACAGGCACAGTCGACTTCATCTTCGGTGATGCAGCTGTGGTGCTCCAGAACTGCATCCTGATTATTAGGAAGCCAGATGACAGCCAGCAGAACACAGTGACAGCTCAAGGGAGAGAGGACAAGCAGCAAGCGACTGGAATCGTGCTGCAGAAGTGTACAATCAAAGCTGATGACGAACTGCTAACAGTGAAGGACAAGGTAAGGAGCTACCTTGGAAGGCCATGGAAGCTGTACTCAAGAACCGTTGTGATGGAATCAGAAATAAGTGACATCATTCACCCTGATGGATGGACGGCTTGGATCGGAGACTTTGCTCTGAAAACATTGTACTATGCTGAGTACGGTAACACAGGAGCTGGTTCCTCCACCAACGCTAGGATCAAGTGGCCTGGTTACCGAGTGATCAACAAGGAAGAAGCTACCATGTTCACTCCAGGCTCTTTCTTGAGAGGCTCATGGGTCCAGGGCACAGGAGTGCCCTCTACGCAAGGCTTCTACAATTAA 1818 0.4939 MAFQDFDLISERRRNEKKQKMRKRIMIGVVSSIVLVGMIGAVLFVVVKNDDAGNNKSTNNKSRTSHSPPHSEGGSPKEHVAHSEKIVQVVCSSADFKDRCEAPLNKAMQDDPKLSEPKDLLKIYVKLAEEELSKAFNSTKSVKFDSEEEKGAFEDCQKLFEDAKDDIATSISELSKTELKNISDKTPDLNSWLSAVISFQQTCMDGFPEGNIKTELHNLMNDSKEFVSNSLAILSQVASALSTLQNIDAPSHGRSLLSSNSPAATLDKTDGFPSWINQEDRRILKAVDNKPAPNVTVAKDGSGNFKTISECLNAVPQNYEGRYVIYVKEGIYDEPVMITKNMQNITMYGDGSQKTIVTGNKNFRDGVRVFLTASFVVEGDGFTGMAMGFRNTAGPGGSQAVAARVQSDRSVFANCRFEGYQSTLFTQAHRQFYRSCIVTGTVDFIFGDAAVVLQNCILIIRKPDDSQQNTVTAQGREDKQQATGIVLQKCTIKADDELLTVKDKVRSYLGRPWKLYSRTVVMESEISDIIHPDGWTAWIGDFALKTLYYAEYGNTGAGSSTNARIKWPGYRVINKEEATMFTPGSFLRGSWVQGTGVPSTQGFYN* 606
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1314 605 Gene3D Invertase/pectin methylesterase inhibitor family protein 83 238 IPR035513 -
Pvu3g1314 605 PANTHER PECTINESTERASE 14 603 - -
Pvu3g1314 605 SMART PMEI_2 82 233 IPR006501 GO:0004857
Pvu3g1314 605 MobiDBLite consensus disorder prediction 53 80 - -
Pvu3g1314 605 PANTHER PECTINESTERASE 14 603 - -
Pvu3g1314 605 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 85 236 IPR035513 -
Pvu3g1314 605 ProSitePatterns Pectinesterase signature 2. 438 447 IPR033131 -
Pvu3g1314 605 Gene3D - 288 603 IPR012334 -
Pvu3g1314 605 MobiDBLite consensus disorder prediction 53 71 - -
Pvu3g1314 605 TIGRFAM PME_inhib: pectinesterase inhibitor domain 81 237 IPR006501 GO:0004857
Pvu3g1314 605 SUPERFAMILY Pectin lyase-like 291 601 IPR011050 -
Pvu3g1314 605 Pfam Pectinesterase 294 589 IPR000070 GO:0030599|GO:0042545
Pvu3g1314 605 CDD PMEI-like_3 90 239 - -
Pvu3g1314 605 Pfam Plant invertase/pectin methylesterase inhibitor 86 233 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1314 Pvu-Chr3 30869684 30872074 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1314 1 605 Carbohydrate Esterase AT2G26450 47.059 0.0 589
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1314 - - vun:114177564 978.008
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1314 3 30869684 30872074 Pvu9g2299 9 32975759 32978032 PCT