Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1299 ATGGGTGGCTTAGCTAAGATAAGAAGACACCATGTTGTGAGCCTGGTGGTGGCAATAGGATTGTGCATCACTGCTGTTGAATGCACCAAACATGTGAGCATCAAGAACAGTCTAGGATCTGGAAAAAACATGAGTTTGCATTGCCAGTCCAAGGACAATGATCTGGGACAGCAAAACATAGAAAATGGGAATGAGTTTGGGTGGGACTTCTCTGACAATGTTTTTGGAAGCACTCTGTTTTTCTGTGATCTGGGGTGGCAAAATGTTGAGCACTACCATTTTGATGCTTATTCCTTCGGCAGGGACAGGGTACGATGTGATGGTGCAGGATGTTCATGGCTAGTATCTGCTGAAGGCATTTATGGCTTCAATGGACAAACGGGCTTCTGGGAATTCATGTTCCAATGGCCAAATTAA 417 0.446 MGGLAKIRRHHVVSLVVAIGLCITAVECTKHVSIKNSLGSGKNMSLHCQSKDNDLGQQNIENGNEFGWDFSDNVFGSTLFFCDLGWQNVEHYHFDAYSFGRDRVRCDGAGCSWLVSAEGIYGFNGQTGFWEFMFQWPN* 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1299 138 Pfam Plant self-incompatibility protein S1 31 136 IPR010264 -
Pvu3g1299 138 PANTHER - 20 121 IPR010264 -
Pvu3g1299 138 PANTHER PUMILIO HOMOLOG 15-LIKE 20 121 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1299 Pvu-Chr3 30567958 30568374 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1299 32 136 Carbohydrate Esterase AT3G16970 32.710 8.16e-14 62.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1299 - - gmx:102670225 240.35