Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1294 ATGAGCCAAAGAGGCAAGAGTTGTGGAGGCATGAAGCTGCTGAAGCAGTGGATGTTTTTACTTGTGGGGTTGGTGATATTGAAATGGGTTGAAGGCTTGGAAGATACTAATGTGACAGACATAGATATGCAATATGTCAGTGGAAAAGGTTTCTACAGACCTTTGATGGTTGGGCTTACACTTATTAATGGTGCTGCTGCTAAAGGAGCTGTCTGCCTGGATGGATCTTTACCAGGTTACCACTTCCATCGGGGATATGGTTCAGGATCAAACAGTTGGCTTATACAATTGGAGGGAGGAGGCTGGTGTGGAACTATAAAAAATTGTCTTTACAGTAAGAAAACACGCCATGGTTCTTCATATTTTATGGAAAAGCAAATACCATTTATTGGGATATTGAGCAACAAAGCTCAGGAAAATCCAGATTTTTTCAATTGGAATAGAATAAAAGTCCGATATTGTGATGGGGCATCATTTAGTGGGGACAGTCAAAATGCGGGAGCAGGATTGTATTTCAGAGGGCAACGCATTTGGCAAGCTGCTATGGAAGATCTAATGTCAAAAGGAATGCGCTATGCCAAACAGGCTCTTCTATCTGGATGTTCTGCTGGAGGTTTAGCTACTATTATACATTGTGATGAATTTCGGGAATTGTTTCCTAGGACCACAAGAGTAAAATGCTTGAGTGATGCTGGATTGTTCCTTGATTCTGTTGATGTATCTGGCCGTCGCAGCTTAAGGAATTTGTTTGGAAGTGTGGTCACCTTACAGGGAGTGCGAAAGAGCCTTCCAAGAAGTTGTACCAGTCGCCTCAATCCAATTTTGTGCTATTTCCCTCAGCACTTAATTGCCAGTGTTAGAACACCACTGTTTCTTCTCAATGCAGCTTATGATACTTGGCAGATTCAAGCCAGTCTTGCTCCACCATCTGCTGACTACCGATGGAACTGGTATGAATGCAGAAAAGATTATGCACGTTGCAGTGCACCACAGATACAGTATCTTCAAGGTTTTCGAAATCAGATGCTTAGATCTACAAGAGCCTTCTCACGGTCTTATAAAAATGGTTTATTCATAAATTCATGTTTCGCTCATTGTCAATCAGAAAGACAGGATACGTGGTTTGCTCATGATTCTCCTCGTATTGGAAATAGAATGTACGAAGATACAGAGAAGGTGTACAGGAGGGTGGTACATCGTTTTCTTTTGAAAGGAACATTAGAAAAGGAAAGTGTCTATTCCTGCTATCATCGAAATGCAAATGGAACTGCTAATTATGTTGTAAGGTAA 1290 0.4124 MSQRGKSCGGMKLLKQWMFLLVGLVILKWVEGLEDTNVTDIDMQYVSGKGFYRPLMVGLTLINGAAAKGAVCLDGSLPGYHFHRGYGSGSNSWLIQLEGGGWCGTIKNCLYSKKTRHGSSYFMEKQIPFIGILSNKAQENPDFFNWNRIKVRYCDGASFSGDSQNAGAGLYFRGQRIWQAAMEDLMSKGMRYAKQALLSGCSAGGLATIIHCDEFRELFPRTTRVKCLSDAGLFLDSVDVSGRRSLRNLFGSVVTLQGVRKSLPRSCTSRLNPILCYFPQHLIASVRTPLFLLNAAYDTWQIQASLAPPSADYRWNWYECRKDYARCSAPQIQYLQGFRNQMLRSTRAFSRSYKNGLFINSCFAHCQSERQDTWFAHDSPRIGNRMYEDTEKVYRRVVHRFLLKGTLEKESVYSCYHRNANGTANYVVR* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1294 429 Pfam Pectinacetylesterase 55 388 IPR004963 GO:0016787
Pvu3g1294 429 PANTHER NOTUM-RELATED 20 386 IPR004963 GO:0016787
Pvu3g1294 429 PANTHER PECTIN ACETYLESTERASE 20 386 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1294 Pvu-Chr3 30522226 30529245 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1294 6 385 Carbohydrate Esterase AT1G57590 62.371 7.19e-179 504
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1294 K19882 - gmx:100817557 747.658
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1294 3 30522226 30529245 Pvu3g1294 3 30522226 30529245 ECH
Pvu3g1294 3 30522226 30529245 Pvu1g2289 1 48376243 48380225 ECH
Pvu3g1294 3 30522226 30529245 Pvu7g2141 7 44683702 44690967 ECH