Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1287 ATGAAGGACAAAGTTGCATTCAAAAACTTGCTGGAAGTTCAGAAAAAGGCATCTGTTAGTAATACAGATGCACTGAACTGGACTCAGGAACCCTCCATTACAACTACTCTAGGATCTACTCTTCTTGGTTTGAGGCTTAATAACTTTGAGCTTCCCCAAAATCTTGAGCAACAGCCACTGAATCAATTGGGCTTGTTGCAAATTGAGCTAGAGGAGGTGAAGAAGGAGAATCAAAATTTAAGGTCAATGCTTAATAAGATCACTGAACACTACGCTGCTCTTCAGAATCAGTTATTGTTGGCGATGCGGCCAAAGAAACTATCTTCATCACCTCAGAATAATGAGGACATGCAGAAGGATAGCAGGCAAGATAACGTGAAGAAGCCAGGTTTACCCTCGTGGCAGTTCTTACACAGTGGTAAAATGAATAAGCAAGTAACACAACAAGAAGCAAAAATGATAGAAGAACAGGCATTTGAGGCTTCTTGCAAGAAAGCTAGAGTGTCCATAAGAGCACGATCAGAATCTTTGAAGGGTGATGGGTGTCTATGGAGAAAATATGGACAAAAGATATCAAAGGGTAACCCTTGTCCTCGAGCCTACTATCGTTGCAACATGGGAACAGCATGTCCAGTTCGCAAGCAGGTTCAGAGGTGTGCTACTGATGAAAGTGTTATGATCACAACCTATGAAGGGAACCATAATCATTCACTCCCTCAAGCAGCCAGATCCATGGCTTGCACAACATCAGCAGCACTCACCATGTTCCTTTCTGGCTCAACCACTAGTTCACATGCCACCACTTTTTCAAATCATGACCTTTTCTCTTCACTGTCTGCTTCTACCCACTATCCATCTGCATCATCTTCTTTAACTGTAACACTCGACTTAACCCAGCCCCCTAAGAACTACCCCAAATTCCTAACTGCAACTGCTCTTTCTTCAAGCCATTCTCAAACTTTCCCTCTTTCATTGAACGGTTACCCTCAACAGTGTGAGGGATTACCCTTGGAGAAAGAGCTTCCCTTGGTGGATGTTCTTAGTGCTGCCATCACCAGGGATCCTTCTCTTAGGGCAGCATTAGAAGCAGCCGTTTCCTCTTTGGTTGGAGATTCTCAGAACATCAGTAACCATGGCCAACTTAGTAGGAGTGATTATGACCCTTCTTCTAAGATGTCTGCTGAAGCTTCACGGATTTAG 1200 0.435 MKDKVAFKNLLEVQKKASVSNTDALNWTQEPSITTTLGSTLLGLRLNNFELPQNLEQQPLNQLGLLQIELEEVKKENQNLRSMLNKITEHYAALQNQLLLAMRPKKLSSSPQNNEDMQKDSRQDNVKKPGLPSWQFLHSGKMNKQVTQQEAKMIEEQAFEASCKKARVSIRARSESLKGDGCLWRKYGQKISKGNPCPRAYYRCNMGTACPVRKQVQRCATDESVMITTYEGNHNHSLPQAARSMACTTSAALTMFLSGSTTSSHATTFSNHDLFSSLSASTHYPSASSSLTVTLDLTQPPKNYPKFLTATALSSSHSQTFPLSLNGYPQQCEGLPLEKELPLVDVLSAAITRDPSLRAALEAAVSSLVGDSQNISNHGQLSRSDYDPSSKMSAEASRI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1287 399 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 1 381 - -
Pvu3g1287 399 MobiDBLite consensus disorder prediction 106 139 - -
Pvu3g1287 399 ProSiteProfiles WRKY domain profile. 173 239 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1287 399 MobiDBLite consensus disorder prediction 372 399 - -
Pvu3g1287 399 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 1 381 IPR044810 GO:0003700
Pvu3g1287 399 Coils Coil 63 97 - -
Pvu3g1287 399 SUPERFAMILY WRKY DNA-binding domain 177 239 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1287 399 Gene3D WRKY domain 162 240 IPR036576 GO:0003700|GO:0006355|GO:0043565
Pvu3g1287 399 SMART WRKY_cls 178 238 IPR003657 GO:0003700|GO:0006355|GO:0043565
Pvu3g1287 399 Pfam WRKY DNA -binding domain 180 236 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1287 Pvu-Chr3 30385985 30389924 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1287 151 299 WRKY Transcription Factor Family AT4G04450 55.280 1.16e-53 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Pvu3g1287 WRKY 7.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1287 - - vun:114177436 555.444
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1287 3 30385985 30389924 Pvu2g0925 2 14907240 14909229 PCT
Pvu9g2279 9 32729678 32733766 Pvu3g1287 3 30385985 30389924 PCT