Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1278 ATGGGAGATGAGGTTGTGTTGTTGGATTTCAATCTGAGTATGTTCTGTGTAAGAGTGAAGATTGCATTGACAGAGAAAGGGGTTGAGTTTGAGAACAAGGTAGAGGATTTGGTGAACACAAAAAGTGCTCTGCTTCTGCAAATGAACCCTGTTCATAAGAAAGTTCCTGTTCTTATCCACAATGGCAAGCCAATCTCTGAATCTCTCATAATTGTTGAGTACATTGATGAGATTTGGAGGGATAGAGCTCCACTTTTGCCCACTGATCCCTACCAGAGAGCTCAAGCCAGGTTCTGGGCTAATTTTGTTGATAATAAGGTGCATGAAGTTGCAAAGAGGATATGGACTGGGAAGATAGGAGAACATGAGGCAGAGAAGAAGGAGTTAGTAGAGAATTTGAAGCAATTGGAGGAGGCTCTTGGGGACATGCCATATTTTGGAGGTGACACATTTGGGTTTGTTGATATTGCTTTGATTCCCTTTTACAAATGGTTCTCTTCTTATGAGAAAATTGGCAACTTCAAGCTGGACTGCCCAAAACTCACTGCTTGGGCAAACAGATGTTTGGTGAAAGAAAGTGTTTCCAAATTTGTTTCTGATGAAAAGGATGTCTATGAGTTTATTCTGAGCCATAGGAAAAGAATTGGGGTAGATTGA 657 0.4094 MGDEVVLLDFNLSMFCVRVKIALTEKGVEFENKVEDLVNTKSALLLQMNPVHKKVPVLIHNGKPISESLIIVEYIDEIWRDRAPLLPTDPYQRAQARFWANFVDNKVHEVAKRIWTGKIGEHEAEKKELVENLKQLEEALGDMPYFGGDTFGFVDIALIPFYKWFSSYEKIGNFKLDCPKLTAWANRCLVKESVSKFVSDEKDVYEFILSHRKRIGVD* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1278 218 SFLD Main (cytGST) 3 215 - -
Pvu3g1278 218 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 3 212 IPR045073 -
Pvu3g1278 218 Pfam Glutathione S-transferase, N-terminal domain 8 77 IPR004045 -
Pvu3g1278 218 PANTHER GLUTATHIONE S-TRANSFERASE, AMINO-TERMINAL DOMAIN PROTEIN 3 212 - -
Pvu3g1278 218 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
Pvu3g1278 218 SFLD Main.3: Omega- and Tau-like 3 215 IPR045073 -
Pvu3g1278 218 Coils Coil 119 139 - -
Pvu3g1278 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 207 IPR010987 -
Pvu3g1278 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
Pvu3g1278 218 SUPERFAMILY GST C-terminal domain-like 77 215 IPR036282 -
Pvu3g1278 218 Gene3D - 89 218 - -
Pvu3g1278 218 CDD GST_C_Tau 90 209 IPR045074 GO:0004364|GO:0006749
Pvu3g1278 218 CDD GST_N_Tau 5 79 - -
Pvu3g1278 218 Pfam Glutathione S-transferase, C-terminal domain 123 187 - -
Pvu3g1278 218 Gene3D Glutaredoxin 1 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1278 Pvu-Chr3 30261497 30263890 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1278 1 218 Glutathione S-transferase Gene Family AT1G17180 57.727 2.06e-92 268
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1278 K00799 - gmx:100781460 388.267