Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1270 ATGGCAGAGGAAATAGAGTTGAATGGAGATCCTAAAAGCAAGCAAGACTCAAAGAAGAGCGAGGCCAAAGATGAACCCGCCAAAACAGTACCCTTATACAAACTTTTCTCATTTGCTGATCCTTTGGATCATTTATTGATGTTTTTGGGGACTGTTGGTGCTTTTGGGAATGGAATCTCCTTGCCCTTGATGACTCTGATATTCGGAAATATGATCAATGCATTTGGAGGTAACAATAACTCCAAAGAAATTGTTGATGAAGTTTCCAAGGTGTCTCTGAAATTTGTATACTTGGCTGTCGGCACCTTTTTTGCATCACTTTTGCAGTTGACTTGTTGGATGATCACTGGGGAGAGACAAGCCGCAAGAATTAGAGGCTTATACCTTCAAACTATTCTGAGGCAAGATGTCACCTTCTTTGATAAGGAAACAAGAACTGGTGAGGTTGTTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGAGAGAAGGTAGGACAGTTCTTGCAGTTCATGGCAACTTTCGTTGGAGGTTTTGTAGTAGCATTCATCAGGGGATGGCTTCTAGCTGTTGTCATGCTATCTACTATTCCACCTCTTGCTTTCTGTGGTGCTATGGTAGGCCTGGTTGTTTCAAAAGCCTCATCCAGGGGACAAGAAGCTTATTCTGTAGCAGCAAGTGTAGTGGAGCAGACAATTGGTTCTATCAGAACTGTTGCTTCATTCACTGGGGAGAAGCAAGCTATAACTAATTATAATCAGTCCTTAATCAAAGCTTACAAGGCTGGAGTGCAGGAGGCACTAGCTTCTGGTTTTGGGTTTGGTTCTCTCTACTTTGTTTTTACCTGCAGTTATGGTTTGGCTATATGGTTTGGTGCAAAAATGGTAATAGAGAAAGGTTATACAGGAGGACAGGTTGTGACAGTAATGATGGCTGTTTTGACTGGCTCCATGTCTCTAGGGCAGGCATCTCCAAGCTTGAGCGCTTTTGCTGCTGGAAAAGCTGCTGCCTTTAAGATGTTTGAAACGATTAAGAGGAAGCCAGAAATTGATGCTTATGACACTACGGGTCAGCAGCTTGATGACGTTCGTGGAGATATAGAGCTTAGGGAGGTTTACTTTAGTTATCCTACAAGACCAGATGAACTGATCTTCAATGGATTTTCTCTTTCAATACCAAGTGGCACTACGACAGCTTTGGTAGGGGAAAGTGGGAGTGGGAAATCCACAGTTGTAAGTTTGATAGAGAGATTTTATGATCCACTGTCAGGTGAAGTTCTCATTGACAGTATCAACCTCAAAGAATTTCAACTGAAGTGGATCAGACAGAAAATAGGCCTAGTTAGCCAGGAACCAGTTCTCTTTACTTGCAGTATTAAAGAGAATATTGCCTATGGCAAGGATGGTGCGAGTGATGAGGAAATCAGAGCTGCAGCAGAAGTAGCCAATGCTGCCAAATTTATAGATAAACTTCCTCAGGGACTAGACACAATGGTTGGTGAGCATGGAACTCAACTATCTGGGGGTCAAAAGCAAAGAGTTGCAATAGCAAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACTAGTGCTCTTGATGCTGAATCTGAGAAAATTGTGCAGGAGGCATTGGACAGAATAATGATAAACCGAACAACTGTCATTGTAGCCCACCGCTTAAGTACTATAAGGAATGCTGATAGCATTGCTGTTATTCATCAGGGAAAAATAGTTGAAAGAGGTTCACATGCTGAGCTCACCAAAGATCCTAACGGAGCCTATAGCCAGCTGATTAGATTGCAAGAAATTAAAGGATCAGAACAAAATGGTGAAAATGACAGAGAGAAGCTAGAAAGTATAGTGCACTCAGTGCACTCTGGAAGACAATCAAGTCAAAGGTCTTTCTTAAGATCTATAAGCCAAAGATCATCAGGACTTGGAAGCAGTGGTCATAACTCATTCTCAGCATCACATGGTGTGCCAGTATCAGTTGGCTTCTTGGAACCTGCAAGAGGAGAACCTCAAACACCTCCTCCTTCAACTTCACCACCGGAAGTGCCACTCTCTCGCCTGGCATATTTAAACAAGCCAGAGATTCTAGTTTTACTGGCAGGGACTCTAGCTGCAGTAATAAATGGAGTTTTACTACCCATTATTGCAGTCTTTATCTCCAAAATGATAACTATTTTTTATGAGCCACATGATGAACTTCGTAAAGATTCAAAACTCTGGGCATTGCTATTTGTTGCACTTGGTCTGGTATCATTCACCATGCTTCCATGTAGATTCTACCTTTTTGGTGTTGCTGGGGGCAAGTTGATAAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCAGAGCATTCAAGTGGAGCAATTGGAGCGAGGCTTTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGCTGCAACAGCTGTCGGCAGTTTGGTAATTGCTTTTGAAGCAAGCTGGCAGCTTGCCTTTATAGTGCTTGTTTTGGCACCGCTATTAGGACTAAATGGATACGTGCAATTTAAGTTCATGAAAGGATTCAGCGCAGATGCAAAGAAACTGTATGAGGAAGCAAGCCAAGTGGCAAATGATGCTGTAGGCAGTATAAGAACAGTTGCTTCTTTCTGTGCCGAAAAGAGGGTGATGGAATTATACCAGGAAAAATGTGAAGGACCAATTAAGACAGGCATAAGGCGAGGGATAATAAGTGGAATCAGTTACGGGGTATCATTCTTCTTGCTTTACGCAGTTTATGCATGCAGTTTTTATGCTGGAGGTCGACTAGTAGAGGATGGAAAATCAACATTCTCAGATGTTTTCCGTGTCTTTTTTGCATTCAGCATGGCAGCTATGGGAATCTCTCAATCTGGCTCTTTGGTACCTGATTCAACTAACTCAAAAAGTGCTGCTGCTTCTGTATTTGCTATTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTCACATTGGAAGAAGTCAAGGGAGAGATTGAATTTAAAAATGTAATTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTTTGCTTGACTATTCATAGTGGGAAGACTGTTGCACTGGTTGGGGAAAGTGGAAGTGGAAAATCAACAGTGATCTCACTATTGCAGAGGTTTTATGATCCAGACTCAGGTCACATTACACTGGATGGAAAAGAAATCCAAAGGATGCAAGTTAAATGGCTAAGGCAACAGATGGGTCTGGTGAGCCAAGAGCCTGTGCTGTTTAATGACACCATTCGTGCAAATATTGCATATGGCAAAGGCGGGAATGCAACAGAAGCAGAAATTATAGCTGCAGCAGAACTGGCAAATGCTCATAATTTTACTAGTAGTTTGCAGGAGGGTTATGAAACAGTAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGAGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTATTACTAGATGAAGCCACGAGTGCACTTGATGCTGAGTCTGAAAAGGTGGTTCAGGATGCACTAGACCGTGTTATGGTGAACCGAACCACAATAGTAGTGGCTCATAGGTTATCCACTATAAAGGGTGCGGATTTAATTGCAGTAGTTAAAAATGGTGTGATAGCAGAGAAGGGAAAGCATGAAGCATTACTCAGCAAGGAAGGTTCACATGCTGAGCTCACCAAAGATCCTAACGGAGCCTATAGCCAGCTGATTAGATTGCAAGAAATTAAAGGATCAGAACAAAATGGTGAAAATGACAGAGAGAAGCTAGAAAGTATAGTGCACTCAGTGCACTCTGGAAGACAATCAAGTCAAAGATCTTTCTTAGGATCTATAAGCCAAAGATCATCAGGACTTGTTGGTCATAACTCATTCTCAGCATCACATGGAGTGCCAGTATCAGTTGGCTTCTTGGAACCTGCAAGAGGAGAACCTCAAACACCTCCTCCTTCAACTTCACCACCGGAAGTGCCACTCTCTCGCCTGGCATATTTAAACAAGCCAGAGATTCTAGTCTTACTTGCAGGGACTCTAGCTGCAGTAGTAAGTGGATTATTATTACCCATTAGTGCACTCTTCGTTTCCAAAATGATAAGTATTTTCTATGAGCCACATGATGAACTTCGTAAAGATTCAAAGCGTTGGGCATTACTATTTGTTGCACTTGGTGTGGTATCATTTATTACAGCTCCTTGTAGATTCTACCTTTTTGGTGTTGCTGGCGGTAAGTTGATAAAAAGGATTCGGAAAATGTGTTTTGAGAAAGTTGTTCACATGGAAGTTAGCTGGTTCGATGAAGCGGAGCATTCAAGTGGAGCAATTGGAGCGAGGCTCTCTTCTGATGCAGCTGCTGTTCGAGCTTTGGTTGGGGATGCACTTGGTTTGCTGGTTCAAAATGCTGCTACAGCTGTGGGCTGTTTGGTAATTGCATTTGAAGCAAGCTGGCAGCTTGCTTTTATAGTGCTTGCTTTGGCACCGTTATTAGGACTAAATGGATACGTGCAATTTAAGTTCATGAAAGGATTCAGTGCAGATGCAAAGAAACTGTACGAGGAAGCAAGTCAAGTCGCAAGTGATGCTGTAGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAAAGAAGGTGATGGAATTGTACCAGAAAAAATGTGAAGAACCAATTAGGACAGGCATAAGGCGAGGGATAATAAGTGGAATTGGTTATGGGGTATCATTCTTCATGCTTTACGCAGTTTATGCATGCAGTTTTTATGCAGGAGCTCGACTTGTAGAGGATGGAAAAACAACATTCTCCGATGTTTTCCGTGTGCTTTTTGCGCTCAGCTTGGCAGCAATGGGACTTTCTAGATCTGCCTCTTTGGTCACCGATTCCGCTAAATCAAAAAGCGCTGCCGCTTCTGTATTTGGTGTTCTTGATCGAAAGTCACAAATTGACCCAAGTGATGACTCTGGATTCATATTGGAAGAAGTCAATGGAGAGATTGAATTTAACAATGTCAGTTTCAAGTATCCTACCAGACCTGATGTTCAAATATTCAGAGATCTCTGTTTGACTATTCATAGTGGGAAGACAGTTGCACTGGTTGGGGAAAGTGGAAGTGGAAAATCAACAGTGATCTCGTTATTGCAGAGGTTTTATGATCCAGACTCAGGTCACATTACACTGGATGGAAAAGAAATCCAAAGGATGCAAGTTAAATGGCTAAGGCAACAGATGGGTCTTGTGAGCCAAGAGCCTGTGCTGTTTAATGACACCATTCGTGCAAATATTGCATATGGAAAAGGCGGGGATGCAACAGAGACAGAAATTATAGCTGCAGCAGAACTGGCTAATGCTCATAATTTTACTAGTAGTTTGCAGGAGGGTTATGAAACAATAGTAGGGGAGAGAGGGATTCAACTATCTGGAGGGCAGAAGCAGCGAGTGGCAATTGCACGAGCTATAGTGAAGAATCCAAAAATATTATTACTAGATGAAGCCACGAGTGCACTTGATGCTGAGTCTGAAAAAGTGGTTCAGGATGCACTAGACCGTGTTATGGTGAACCGAACCACAATAGTAGTGGCTCATAGGTTATCCACTATAAAGGGTGCGGATTTAATTGCAGTAGTTAAAAATGGTGTGATAGCAGAGAAGGGAAAACATGAAGCATTACTGAACAAAGGAGGTGACTATGCTTCCTTAGTAGCATTGCACACAACTGCTTCTACATCCTAG 5838 0.4229 MAEEIELNGDPKSKQDSKKSEAKDEPAKTVPLYKLFSFADPLDHLLMFLGTVGAFGNGISLPLMTLIFGNMINAFGGNNNSKEIVDEVSKVSLKFVYLAVGTFFASLLQLTCWMITGERQAARIRGLYLQTILRQDVTFFDKETRTGEVVGRMSGDTVLIQDAMGEKVGQFLQFMATFVGGFVVAFIRGWLLAVVMLSTIPPLAFCGAMVGLVVSKASSRGQEAYSVAASVVEQTIGSIRTVASFTGEKQAITNYNQSLIKAYKAGVQEALASGFGFGSLYFVFTCSYGLAIWFGAKMVIEKGYTGGQVVTVMMAVLTGSMSLGQASPSLSAFAAGKAAAFKMFETIKRKPEIDAYDTTGQQLDDVRGDIELREVYFSYPTRPDELIFNGFSLSIPSGTTTALVGESGSGKSTVVSLIERFYDPLSGEVLIDSINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGASDEEIRAAAEVANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESEKIVQEALDRIMINRTTVIVAHRLSTIRNADSIAVIHQGKIVERGSHAELTKDPNGAYSQLIRLQEIKGSEQNGENDREKLESIVHSVHSGRQSSQRSFLRSISQRSSGLGSSGHNSFSASHGVPVSVGFLEPARGEPQTPPPSTSPPEVPLSRLAYLNKPEILVLLAGTLAAVINGVLLPIIAVFISKMITIFYEPHDELRKDSKLWALLFVALGLVSFTMLPCRFYLFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNAATAVGSLVIAFEASWQLAFIVLVLAPLLGLNGYVQFKFMKGFSADAKKLYEEASQVANDAVGSIRTVASFCAEKRVMELYQEKCEGPIKTGIRRGIISGISYGVSFFLLYAVYACSFYAGGRLVEDGKSTFSDVFRVFFAFSMAAMGISQSGSLVPDSTNSKSAAASVFAILDRKSQIDPSDDSGFTLEEVKGEIEFKNVIFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQRMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGNATEAEIIAAAELANAHNFTSSLQEGYETVVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVNRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLSKEGSHAELTKDPNGAYSQLIRLQEIKGSEQNGENDREKLESIVHSVHSGRQSSQRSFLGSISQRSSGLVGHNSFSASHGVPVSVGFLEPARGEPQTPPPSTSPPEVPLSRLAYLNKPEILVLLAGTLAAVVSGLLLPISALFVSKMISIFYEPHDELRKDSKRWALLFVALGVVSFITAPCRFYLFGVAGGKLIKRIRKMCFEKVVHMEVSWFDEAEHSSGAIGARLSSDAAAVRALVGDALGLLVQNAATAVGCLVIAFEASWQLAFIVLALAPLLGLNGYVQFKFMKGFSADAKKLYEEASQVASDAVGSIRTVASFCAEKKVMELYQKKCEEPIRTGIRRGIISGIGYGVSFFMLYAVYACSFYAGARLVEDGKTTFSDVFRVLFALSLAAMGLSRSASLVTDSAKSKSAAASVFGVLDRKSQIDPSDDSGFILEEVNGEIEFNNVSFKYPTRPDVQIFRDLCLTIHSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQRMQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGGDATETEIIAAAELANAHNFTSSLQEGYETIVGERGIQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVNRTTIVVAHRLSTIKGADLIAVVKNGVIAEKGKHEALLNKGGDYASLVALHTTASTS* 1946
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1270 1945 MobiDBLite consensus disorder prediction 628 662 - -
Pvu3g1270 1945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1690 1938 IPR027417 -
Pvu3g1270 1945 ProSitePatterns ABC transporters family signature. 509 523 IPR017871 GO:0005524
Pvu3g1270 1945 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 710 996 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 PANTHER - 1259 1941 - -
Pvu3g1270 1945 PANTHER - 14 1256 - -
Pvu3g1270 1945 ProSitePatterns ABC transporters family signature. 1171 1185 IPR017871 GO:0005524
Pvu3g1270 1945 MobiDBLite consensus disorder prediction 673 692 - -
Pvu3g1270 1945 SUPERFAMILY ABC transporter transmembrane region 697 1015 IPR036640 GO:0005524|GO:0016021
Pvu3g1270 1945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 362 608 IPR027417 -
Pvu3g1270 1945 CDD ABC_MTABC3_MDL1_MDL2 1031 1267 - -
Pvu3g1270 1945 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1380 1666 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 CDD ABC_6TM_Pgp_ABCB1_D1_like 47 331 - -
Pvu3g1270 1945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1031 1268 IPR003439 GO:0005524
Pvu3g1270 1945 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 48 335 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 Gene3D ABC transporter type 1, transmembrane domain 1348 1689 IPR036640 GO:0005524|GO:0016021
Pvu3g1270 1945 SMART AAA_5 1058 1251 IPR003593 -
Pvu3g1270 1945 SMART AAA_5 397 741 IPR003593 -
Pvu3g1270 1945 SMART AAA_5 1728 1921 IPR003593 -
Pvu3g1270 1945 Gene3D ABC transporter type 1, transmembrane domain 93 1005 IPR036640 GO:0005524|GO:0016021
Pvu3g1270 1945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 370 606 IPR003439 GO:0005524
Pvu3g1270 1945 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1020 1266 IPR027417 -
Pvu3g1270 1945 MobiDBLite consensus disorder prediction 1343 1362 - -
Pvu3g1270 1945 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 1259 1941 - -
Pvu3g1270 1945 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 14 1256 - -
Pvu3g1270 1945 MobiDBLite consensus disorder prediction 1 25 - -
Pvu3g1270 1945 ProSitePatterns ABC transporters family signature. 1841 1855 IPR017871 GO:0005524
Pvu3g1270 1945 SUPERFAMILY ABC transporter transmembrane region 1367 1685 IPR036640 GO:0005524|GO:0016021
Pvu3g1270 1945 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1701 1938 IPR003439 GO:0005524
Pvu3g1270 1945 MobiDBLite consensus disorder prediction 630 662 - -
Pvu3g1270 1945 Gene3D - 1692 1944 IPR027417 -
Pvu3g1270 1945 Gene3D - 1021 1274 IPR027417 -
Pvu3g1270 1945 CDD ABC_6TM_Pgp_ABCB1_D2_like 1369 1684 - -
Pvu3g1270 1945 Pfam ABC transporter transmembrane region 1380 1649 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 Pfam ABC transporter transmembrane region 47 321 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 Pfam ABC transporter transmembrane region 710 981 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Pvu3g1270 1945 SUPERFAMILY ABC transporter transmembrane region 28 354 IPR036640 GO:0005524|GO:0016021
Pvu3g1270 1945 CDD ABC_MTABC3_MDL1_MDL2 370 608 - -
Pvu3g1270 1945 Gene3D - 368 621 IPR027417 -
Pvu3g1270 1945 CDD ABC_MTABC3_MDL1_MDL2 1701 1936 - -
Pvu3g1270 1945 CDD ABC_6TM_Pgp_ABCB1_D2_like 699 1014 - -
Pvu3g1270 1945 Pfam ABC transporter 1051 1199 IPR003439 GO:0005524
Pvu3g1270 1945 Pfam ABC transporter 389 537 IPR003439 GO:0005524
Pvu3g1270 1945 Pfam ABC transporter 1721 1869 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1270 Pvu-Chr3 30165391 30178808 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1270 679 1944 Calmodulin-binding Proteins AT2G36910 39.117 0.0 891
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1270 K05658 - gmx:102660078 2086.23