Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pvu3g1269 | ATGGAAGGGGATACCAGTTTGAACGGGGTTACCAACAACAATCAGGAATCAAAGTCGAGGGAGTCCAAAGATGAACCCACCAAATCAGTACCATTATACAAGCTTTTCTCCTTTGCTGATTCTTTGGATTACTTGTTGATGTTGGTGGGCACTGTGGGTGCTATTGGGAATGGAGTCTCCATGCCCTTGATGACTTTGATATTTGGAGACATGATCGATGCATTTGGAGGAACCAGTAGTAACACAGACGATGTTGTTGATGAAGTTTCCAAGGTGTCTCTGAAATTTGTATACTTGGCTGTGGGTACCTTCGCTGCATCACTTTTGCAGTTGGCATGCTGGATGATCACTGGAGAGAGACAAGCTGCAAGAATTAGAGGCTTATACCTTCAAACAATTCTGAGGCAAGATGTGACCTTCTTTGATCAAGAGACTAGTACTGGAGAGGTTATTGGAAGGATGTCAGGTGATACTGTTCTTATTCAAGATGCCATGGGTGAGAAGGTGGGCCAGTTTATTCAGTTAATGGCAACTTTCATTGGAGGGTTTGTTATATCATTCATCAAGGGATGGCTTCTAACTGTTGTCATGCTATCTTGTATTCCACTTCTTGTCTTGGCCGGGGCTATGATGAGCCTGGTTATTACAAGAGCGTCATCCAAGGGACAAGCTGCTTATTCCACAGCTTCAAGTGTTGTAGAGCAGACAATTGGTTCTATCCGAACTGTTGCATCATTCACTGGGGAGAGGCTAGCAATAGATAAATACAATCAGTCCTTAATCAAGGCTTACATGAATGGAGTGCAGGAGGCACTAGCTTCTGGTTTCGGTTTTGGTGCGCTATACTTTGTCATTATCTGCAGTTATGGTTTGGCTATTTGGTTTGGCGCTAAAATGATAATCGAGAAAGGATACAATGGAGGAGAGGTTGTGACTGTAATATTTGCTGTATTGACTGGCTCCATGTCTCTTGGGCAGGCATCTCCAAGCTTGAGTGCTTTTGCTTCAGGACAAGCTGCAGCCTTTAAGATGTTTGAAACAATTAAAAGGAAGCCAGAAATTGATGCATATGACACTAATGGTCGGAGGCTTGAAGACATTCGTGGCGATATAGAGCTTAGGGAAGTTTGCTTTAGTTATCCTACAAGATCTGATGAACTGATATTCAATGGATTTTCCCTTTCAATACCAAGTGGCACTACTGCAGCTTTGGTGGGACAAAGTGGGAGTGGGAAATCCACAGTTGTTAGTTTGATAGAGAGATTTTATGATCCACAGTCTGGTGCAGTACTTATTGATGGTATCAATCTCAAAGAATTTCAACTGAAATGGATTAGACAGAAAATTGGCTTAGTCAGCCAGGAACCAGTTCTCTTTACTTGTAGCATTAAAGAGAATATTGCCTACGGCAAGGATGGAGCAACTGATGAAGAAATCAGAGCTGCGGTAGAACTTGCTAATGCTGCCAAATTTATAGATAAACTACCTCAGGGACTAGATACAATGGTTGGTGAGCATGGAACTCAGCTCTCTGGGGGTCAAAAGCAGAGAGTGGCAATAGCAAGAGCAATTTTGAAAGACCCAAGAATCCTACTTCTGGATGAAGCTACAAGTGCCCTTGATGCTGAATCTGAGAGAATTGTACAAGAGGCATTGGACAGAATAATGATAAACAGAACAACTGTCATTGTTGCCCACCGCTTGAGTACTATAAGGAATGCCGATACCATTGCTGTTATTCATCAAGGAAAAATAGTTGAAAGAGGTTCACACGATGAACTCACCAAGGATCCCGAAGGAGCCTATAGCCAGCTCATCAGACTACAAGAAATTAAGAAGTCAGAACAGAACGCAGAAGACAGAGAAAAACAAGAGAGTATATCGCTTTCGGGAAGGCATTCAAGTAAAAGGTCTTCTTTCTTACGATCTATAAGCCAAGAGTCACTGGGAGTTGGAAACAGTGGTCGTCATTCATTCTCAGCATCATTTGGCGTGCCCACATCTGTTGGGTTTATAGAACCCGTTGGTGAAGGGCCTGAAGACCATCCTACACCATCTCCTTCACCACCAGAAGTGCCTTTCCGTCGCCTGGCTTACCTGAACAAGCCAGAGTTTCCAGTGTTATTCATGGGGACTGTAGCTGCAATGCTAGCTGGAGCAATATTACCTGTTTTTGGACTATTACTCTCCAAAATGATAAGTATTTTCTATGAGACAGATCATGATGAACTTCGTAAAGATTCAAAAGTTTGGGCATTAGTATTTGTTGCTATTGGTGTGGTGTCACTCCTGGTTTATCCGGCTAGATTCTACTTTTTTGGTGTTGCTGGTGGCAAGTTGATCCAAAGGGTCCGGAAAGCATGTTTTGAGAAAGTAGTTCACATGGAGGTAAGCTGGTTTGATGAAGCAGAGAATTCCAGTGGAGCAATTGGAGCAAGGCTCTCTACTGATGCAGCTTCCATTAGAGCTTTGGTTGGGGATGCACTTGGTTTGCTAGTTCAAAATATTGCCTCAGCAATAACTGGATTGGTAATTGCCTTTGAATCAAGCTGGCAGCTTGCTCTTATAATCCTTGTTATGGTGCCTCTACTTGGACTAAACGGATTTCTGCAAGTCAAGTTCTTGAAAGGATTCAGTGCAGATGCAAAGAAATTGTACGAGGAAGCAAGTCAAGTGGCGAATGATGCTGTGGGGAGTATAAGAACAGTTGCTTCTTTCTGTGCTGAAGATAAGGTGATGGAGTTATACCGAGGAAAATGCGAAGGACCAATTAAGACGGGCATAAGGAAAGGGATAATAAGTGGAATTAGTTTTGGTATATCATTCTTTGTGCTGTACGCAGTTTACGCAACAAGTTTTTATGCCGGAGCTCGACTGGTAGAGGACGGCAAAACATCATTCTCAAATGTTTTCCGGGTCTTTTTTGCTCTCAGTATGGCGGCTATAGGAATCTCTCAATCTGGCTCTTTGGCCCCTGATTCAGCCAAAGCAAAAAGTGCTGCTGCTTCCATATTTTCCATTATTGACCGAAAATCACAAATAGACCCAAGTGATGACTCTGGAATAACATCGGAAGAAGTGAAGGGAGAGATTGAGCTTAAGCATGTGAGTTTCAAGTATCCTACAAGACCCGATGTTCAAATATTCAGAGATCTTAGCTTGACCATTCGTAGCGGCAAGACAGTTGCGCTGGTTGGAGAAAGTGGAAGTGGAAAATCAACTGTGATCTCATTGTTACAAAGATTTTATGATCCAGACTCCGGTCACATTACACTGGATGGAAAAGAAATTCAAAGCATTCAAGTTAAATGGCTAAGACAGCAGATGGGCCTAGTGAGCCAAGAGCCGGTGCTGTTTAATGACACCATCCGAGCCAATATTGCATATGGAAAAGGAGACGCAACTGAGGCTGAAATTATAGCTGCAGCAGAATTGGCAAACGCGCATAAGTTCATAAGTAGTTTGCAGAAGGGTTATGACACGGTGGTAGGGGAGCGAGGAGTTCAATTATCTGGGGGGCAGAAGCAGCGGGTGGCAATAGCACGAGCTATAGTAAAGAATCCAAAAATATTACTACTAGATGAAGCCACAAGTGCACTTGATGCTGAGTCTGAGAAAGTGGTTCAGGATGCACTTGACCGTGTTATGGTGGACCGAACCACAATAGTAGTGGCTCATAGGTTATCCACTATTAAGGGTGCTGACGTAATTGCTGTAGTTAAGAATGGGGTGATAGCAGAGAAGGGAAAGCATGAAGTATTACTCAGGAAGGGAGGTGACTACGCTTCTTTAGTTGCATTGCACACAAATGCTTCTACATCTTAG | 3825 | 0.4306 | MEGDTSLNGVTNNNQESKSRESKDEPTKSVPLYKLFSFADSLDYLLMLVGTVGAIGNGVSMPLMTLIFGDMIDAFGGTSSNTDDVVDEVSKVSLKFVYLAVGTFAASLLQLACWMITGERQAARIRGLYLQTILRQDVTFFDQETSTGEVIGRMSGDTVLIQDAMGEKVGQFIQLMATFIGGFVISFIKGWLLTVVMLSCIPLLVLAGAMMSLVITRASSKGQAAYSTASSVVEQTIGSIRTVASFTGERLAIDKYNQSLIKAYMNGVQEALASGFGFGALYFVIICSYGLAIWFGAKMIIEKGYNGGEVVTVIFAVLTGSMSLGQASPSLSAFASGQAAAFKMFETIKRKPEIDAYDTNGRRLEDIRGDIELREVCFSYPTRSDELIFNGFSLSIPSGTTAALVGQSGSGKSTVVSLIERFYDPQSGAVLIDGINLKEFQLKWIRQKIGLVSQEPVLFTCSIKENIAYGKDGATDEEIRAAVELANAAKFIDKLPQGLDTMVGEHGTQLSGGQKQRVAIARAILKDPRILLLDEATSALDAESERIVQEALDRIMINRTTVIVAHRLSTIRNADTIAVIHQGKIVERGSHDELTKDPEGAYSQLIRLQEIKKSEQNAEDREKQESISLSGRHSSKRSSFLRSISQESLGVGNSGRHSFSASFGVPTSVGFIEPVGEGPEDHPTPSPSPPEVPFRRLAYLNKPEFPVLFMGTVAAMLAGAILPVFGLLLSKMISIFYETDHDELRKDSKVWALVFVAIGVVSLLVYPARFYFFGVAGGKLIQRVRKACFEKVVHMEVSWFDEAENSSGAIGARLSTDAASIRALVGDALGLLVQNIASAITGLVIAFESSWQLALIILVMVPLLGLNGFLQVKFLKGFSADAKKLYEEASQVANDAVGSIRTVASFCAEDKVMELYRGKCEGPIKTGIRKGIISGISFGISFFVLYAVYATSFYAGARLVEDGKTSFSNVFRVFFALSMAAIGISQSGSLAPDSAKAKSAAASIFSIIDRKSQIDPSDDSGITSEEVKGEIELKHVSFKYPTRPDVQIFRDLSLTIRSGKTVALVGESGSGKSTVISLLQRFYDPDSGHITLDGKEIQSIQVKWLRQQMGLVSQEPVLFNDTIRANIAYGKGDATEAEIIAAAELANAHKFISSLQKGYDTVVGERGVQLSGGQKQRVAIARAIVKNPKILLLDEATSALDAESEKVVQDALDRVMVDRTTIVVAHRLSTIKGADVIAVVKNGVIAEKGKHEVLLRKGGDYASLVALHTNASTS* | 1275 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pvu3g1269 | 1274 | MobiDBLite | consensus disorder prediction | 613 | 630 | - | - | |
Pvu3g1269 | 1274 | SUPERFAMILY | ABC transporter transmembrane region | 690 | 1015 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu3g1269 | 1274 | MobiDBLite | consensus disorder prediction | 613 | 634 | - | - | |
Pvu3g1269 | 1274 | Pfam | ABC transporter | 1050 | 1198 | IPR003439 | GO:0005524 | |
Pvu3g1269 | 1274 | Pfam | ABC transporter | 390 | 538 | IPR003439 | GO:0005524 | |
Pvu3g1269 | 1274 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 361 | 609 | IPR027417 | - | |
Pvu3g1269 | 1274 | ProSitePatterns | ABC transporters family signature. | 510 | 524 | IPR017871 | GO:0005524 | |
Pvu3g1269 | 1274 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 709 | 996 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu3g1269 | 1274 | CDD | ABC_MTABC3_MDL1_MDL2 | 371 | 609 | - | - | |
Pvu3g1269 | 1274 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 1021 | 1267 | IPR027417 | - | |
Pvu3g1269 | 1274 | SUPERFAMILY | ABC transporter transmembrane region | 34 | 355 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu3g1269 | 1274 | Gene3D | - | 1021 | 1273 | IPR027417 | - | |
Pvu3g1269 | 1274 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 371 | 607 | IPR003439 | GO:0005524 | |
Pvu3g1269 | 1274 | MobiDBLite | consensus disorder prediction | 1 | 25 | - | - | |
Pvu3g1269 | 1274 | PANTHER | ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL | 11 | 1270 | - | - | |
Pvu3g1269 | 1274 | MobiDBLite | consensus disorder prediction | 1 | 16 | - | - | |
Pvu3g1269 | 1274 | CDD | ABC_6TM_Pgp_ABCB1_D1_like | 47 | 344 | - | - | |
Pvu3g1269 | 1274 | Gene3D | ABC transporter type 1, transmembrane domain | 94 | 1005 | IPR036640 | GO:0005524|GO:0016021 | |
Pvu3g1269 | 1274 | ProSiteProfiles | ABC transporter integral membrane type-1 fused domain profile. | 48 | 336 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu3g1269 | 1274 | SMART | AAA_5 | 398 | 584 | IPR003593 | - | |
Pvu3g1269 | 1274 | SMART | AAA_5 | 1058 | 1250 | IPR003593 | - | |
Pvu3g1269 | 1274 | Coils | Coil | 1269 | 1274 | - | - | |
Pvu3g1269 | 1274 | CDD | ABC_6TM_Pgp_ABCB1_D2_like | 698 | 1014 | - | - | |
Pvu3g1269 | 1274 | ProSitePatterns | ABC transporters family signature. | 1170 | 1184 | IPR017871 | GO:0005524 | |
Pvu3g1269 | 1274 | CDD | ABC_MTABC3_MDL1_MDL2 | 1031 | 1265 | - | - | |
Pvu3g1269 | 1274 | ProSiteProfiles | ATP-binding cassette, ABC transporter-type domain profile. | 1031 | 1267 | IPR003439 | GO:0005524 | |
Pvu3g1269 | 1274 | PANTHER | - | 11 | 1270 | - | - | |
Pvu3g1269 | 1274 | Pfam | ABC transporter transmembrane region | 708 | 979 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu3g1269 | 1274 | Pfam | ABC transporter transmembrane region | 47 | 322 | IPR011527 | GO:0005524|GO:0016021|GO:0055085|GO:0140359 | |
Pvu3g1269 | 1274 | Gene3D | - | 369 | 622 | IPR027417 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pvu3g1269 | Pvu-Chr3 | 30155913 | 30161755 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pvu3g1269 | 21 | 1268 | Calmodulin-binding Proteins | AT2G36910 | 45.519 | 0.0 | 1108 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pvu3g1269 | K05658 | - | gmx:100800293 | 2118.2 |