Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1260 AACAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAAGAAAGAATGCGACTTGGGAAATACGAGTTGGGTAGGACCCTTGGTGAAGGCAACTTTGGTAAAGTCAAGTTCGCTAAGCATACTGATTCTGGTCAACCTTTTGCTGTTAAGATCATTGAGAAGAACAAGATCATCCATCTCAACATTACCAACCAGATAAAGAGGGAGATAGCCACCTTAAAGCTCCTCAGACATCCCAACGTTGTCAGATTAAACGAGGTCTTGGCTAGCAAAACAAGAATTTATATGGTACTTGAGTACGTGAATGGAGGGGAGTTATTTGACATAATTGCATCCAAAGCTAAACGTTCGGAAGGTGAAGGTAGAAAGCTGTTCCAACAGTTGATTGATGGGCTGAGCTACTGCCACAGTAAAGGTGTCTTCCACAGGGATCTCAAGCTTGAGAATGTACTGGTGGATAACAAAGGAAACTTGAAAATAACTGATTTTGGTCTTAGTGCTTTACCCCAGCATCTTAGGGAAGATGGATTGCTGCATACAACTTGTGGAAGTCCCAATTATGTTGCACCTGAGGTTCTTGCTAATAAGGGCTATGATGGTGCAACATCAGATGCATGGTCATGTGGTGTTTTGTTATATGTAATCCTAACAGGATGCCTTCCTTTTGATGATAGAAATATGGTAGTTCTCTATCAGAAGATTTTCAAAGGAGATGTTCAGATACCAAAATGGCTATCACCAGGTGCCCAAAACTTGATAAAGAGGATTCTTGATCCCAACCCTGAAAAACGGATAACAATAGCTGGGATCAAAGAAGATCCGTGGTTTAAGAAGGGCTATGTTCCAGCAAATCCTGAAGATGAGGATGTATATGTTGACAATGAAGCCTTTTACATCCATGAAGAGCCAAATGAAGCAGAAGATTCAGGATCACCGACCCTTCTCAATGCATTTCAGTTGATAGGGATGTCTTCATGCCTAGACCTCTCTGGCTTCTTTGAAAAAGAGGATGTCTCTGAGAGAAAGATAAGATTTACATCGAATCTTTCAGTTAAAGATCTGATTGAGAGGATTGAGGACACTGTGACAGAAATGGAATTTATAGTCCAGAGGAAAAATGGCAAATTGAAAGTGAGTTGGGAGAACAAGGTGCAGAAAACTGTCGGATGCCTTTCAGTGACAGTAGAGGTGTTTGAAATAAGCCTATCATTGTACGTGGTAGAACTAAGGAAGTCTTGTGGAGATGCTTCTGTATATAAACAGTTATGCAACAAATTATTGAATGATTTGGGTGTTCCCTCAGCCAAGTAG 1362 0.4031 NKKKKKKKKKKKKKKKKKKKKKKKKKKKKKERMRLGKYELGRTLGEGNFGKVKFAKHTDSGQPFAVKIIEKNKIIHLNITNQIKREIATLKLLRHPNVVRLNEVLASKTRIYMVLEYVNGGELFDIIASKAKRSEGEGRKLFQQLIDGLSYCHSKGVFHRDLKLENVLVDNKGNLKITDFGLSALPQHLREDGLLHTTCGSPNYVAPEVLANKGYDGATSDAWSCGVLLYVILTGCLPFDDRNMVVLYQKIFKGDVQIPKWLSPGAQNLIKRILDPNPEKRITIAGIKEDPWFKKGYVPANPEDEDVYVDNEAFYIHEEPNEAEDSGSPTLLNAFQLIGMSSCLDLSGFFEKEDVSERKIRFTSNLSVKDLIERIEDTVTEMEFIVQRKNGKLKVSWENKVQKTVGCLSVTVEVFEISLSLYVVELRKSCGDASVYKQLCNKLLNDLGVPSAK* 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1260 453 ProSiteProfiles NAF domain profile. 327 351 IPR018451 GO:0007165
Pvu3g1260 453 CDD CIPK_C 333 444 - -
Pvu3g1260 453 ProSiteProfiles Protein kinase domain profile. 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1260 453 Gene3D Kinase associated domain 1, KA1 332 449 - -
Pvu3g1260 453 ProSitePatterns Protein kinases ATP-binding region signature. 44 67 IPR017441 GO:0005524
Pvu3g1260 453 PANTHER SERINE/THREONINE KINASE 29 452 - -
Pvu3g1260 453 SMART serkin_6 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1260 453 Coils Coil 1 33 - -
Pvu3g1260 453 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Pvu3g1260 453 Pfam NAF domain 329 387 IPR004041 GO:0007165
Pvu3g1260 453 MobiDBLite consensus disorder prediction 1 33 - -
Pvu3g1260 453 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 29 452 - -
Pvu3g1260 453 Pfam Protein kinase domain 38 293 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1260 453 Gene3D Transferase(Phosphotransferase) domain 1 27 331 - -
Pvu3g1260 453 MobiDBLite consensus disorder prediction 1 34 - -
Pvu3g1260 453 SUPERFAMILY Protein kinase-like (PK-like) 35 302 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1260 Pvu-Chr3 30064592 30068544 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1260 101 451 CBL-interacting serine-threonine protein kinases AT3G17510 68.169 6.56e-171 482
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Pvu3g1260 Pkinase 2e-73 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1260 K07198 - gmx:100777468 749.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1260 3 30064592 30068544 Pvu9g2273 9 32640345 32647796 PCT