Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1254 ATGGCATCTGATCTAAGTTCGGGGCTGTCCAAGGAAACGTCTGTATTTGGGTTGAAAGCATGGGAACTAATGGGGATCCTGGTTGGGTTGTTCATTATAATCATTCTTGTGGTGGTATCAATATGTCTTACTTCACGAAAGAAATCCAGAAGAGTCAATGGCATGCTTCCCCTTAGCCATATGCTATCTGTTTCAGATGAAATCAAGGAAATTAGAGTTGATCAAGTTTCGTCCAATAATCATCCTCAGAATGGAGCTTTTATGAGTCTGTATGACAGGTTTAGTGACAGGGACTCTGAAAAGGTTTTGATCCAACCAAATAATGGGGAAAATAGCAGTCAATCGGGCTCATTTGTTCATCTTAAGAAAGATGACGGTGGCTCTCAATCAGGTGAAGAAAGTGGTGCCAAGTCTGTTTCTACTTACAGGTCTTCTTCACATCCTATAACTGCACCATCTCCCTTGTCTGGTCTTCCTGAATTCTCTCACCTTGGATGGGGACACTGGTTCACATTAAGGGACCTAGAACTTGCAACAAACAGGTTTTCGAAAGACAATGTTATTGGTGAAGGTGGATATGGAGTTGTTTATCAAGGCCAGTTAATCAATGGGAGCCCCGTGGCTGTTAAGAAGCTACTCAATAATCTAGGACAAGCTGAAAAGGAATTTAGAGTGGAAGTTGAGGCTATTGGCCATGTGCGACACAAGAATTTGGTTAGACTTTTGGGCTATTGCATTGAAGGGACTCACAGGTTGTTGATTTATGAGTATGTTAACAATGGCAATTTAGAGCAATGGCTTCATGGAGCCATGCGGCAGTATGGTTTTCTTACTTGGGATGCTCGAATTAAAATTCTTCTGGGAACAGCTAAAGCGCTATCTTACTTGCACGAGGCAATTGAGCCAAAAGTTGTACATCGAGATATTAAATCAAGCAATATTCTAATTGATGATGACTTCAATGCCAAAATATCTGACTTTGGGCTGGCAAAGTTACTTGGTGCTGGAAAAAGCCATATCACAACTCGCGTAATGGGTACTTTTGGATATGTAGCTCCAGAATATGCCAATTCTGGCTTACTAAATGAGAAGAGTGATGTTTATAGCTTTGGGGTGTTGCTCCTAGAAGCGATCACGGGAAGGGACCCAGTGGATTATAGCCGACCAGCAACTGAGGTAAATTTAGTTGACTGGCTCAAGATGATGGTTGGGAATAGGCGCGCAGAAGAGGTGGTAGACCCTAACATTGAGACCAGGCCTTCAACAAGTGCCCTTAAACGTGCCCTTCTGACTGCTTTGAGGTGTGTTGATCCAGATTCTGAGAAAAGACCAAAGATGAGTCAAGTTGTCCGCATGCTCGAATCAGAGGAATATCCCATACCCCGCGAGGATCGAAGACGCCGAAAGAGTCAAACAGGGAATATGGAGGTGGAGGCCCAGAAGGAGATTTCTGATACAGAGAAGAGTGACAGTCCAGATCCAAAGTCCAATGGCAGAAGGAACCAAAAGAAGTAG 1515 0.4337 MASDLSSGLSKETSVFGLKAWELMGILVGLFIIIILVVVSICLTSRKKSRRVNGMLPLSHMLSVSDEIKEIRVDQVSSNNHPQNGAFMSLYDRFSDRDSEKVLIQPNNGENSSQSGSFVHLKKDDGGSQSGEESGAKSVSTYRSSSHPITAPSPLSGLPEFSHLGWGHWFTLRDLELATNRFSKDNVIGEGGYGVVYQGQLINGSPVAVKKLLNNLGQAEKEFRVEVEAIGHVRHKNLVRLLGYCIEGTHRLLIYEYVNNGNLEQWLHGAMRQYGFLTWDARIKILLGTAKALSYLHEAIEPKVVHRDIKSSNILIDDDFNAKISDFGLAKLLGAGKSHITTRVMGTFGYVAPEYANSGLLNEKSDVYSFGVLLLEAITGRDPVDYSRPATEVNLVDWLKMMVGNRRAEEVVDPNIETRPSTSALKRALLTALRCVDPDSEKRPKMSQVVRMLESEEYPIPREDRRRRKSQTGNMEVEAQKEISDTEKSDSPDPKSNGRRNQKK* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1254 504 ProSiteProfiles Protein kinase domain profile. 182 459 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1254 504 MobiDBLite consensus disorder prediction 131 151 - -
Pvu3g1254 504 Pfam Protein kinase domain 183 451 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1254 504 Gene3D Transferase(Phosphotransferase) domain 1 258 470 - -
Pvu3g1254 504 SUPERFAMILY Protein kinase-like (PK-like) 166 463 IPR011009 -
Pvu3g1254 504 ProSitePatterns Protein kinases ATP-binding region signature. 188 211 IPR017441 GO:0005524
Pvu3g1254 504 MobiDBLite consensus disorder prediction 453 504 - -
Pvu3g1254 504 PANTHER OS01G0323000 PROTEIN 2 504 - -
Pvu3g1254 504 PANTHER RECEPTOR-LIKE KINASE PLANT 2 504 - -
Pvu3g1254 504 MobiDBLite consensus disorder prediction 104 151 - -
Pvu3g1254 504 ProSitePatterns Serine/Threonine protein kinases active-site signature. 304 316 IPR008271 GO:0004672|GO:0006468
Pvu3g1254 504 SMART serkin_6 182 453 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g1254 504 Gene3D Phosphorylase Kinase; domain 1 163 257 - -
Pvu3g1254 504 CDD STKc_IRAK 188 454 - -
Pvu3g1254 504 MobiDBLite consensus disorder prediction 104 119 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1254 Pvu-Chr3 30004516 30009091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1254 17 456 Trihelix Transcription Factor Family AT1G70460 40.000 1.39e-95 303
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Pvu3g1254 Pkinase 1.1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1254 - - gmx:100793499 927.932
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1254 3 30004516 30009091 Pvu9g2262 9 32550955 32555935 PCT