Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1248 ATGGAGTTAACTCCAAGAGGAAGGACTCAGGGCCATGTGTTGACCTTTGAGAGAGATGCGGATTCTTTTGTGGAGGAAGACAAGGAGCTTCAGTCCAAGTGGGCTGCCATAGAGAAGCTACCAACTTTCAAAAGGATTAAGACTTCTTTTGTTGATATCACTCAGGAGGATACTGGAAGCAGCAGCAGAGAAACAGTGGAAAAGTTTGGAGCTTGGAGAAGCAGCAGCAAAAGGGTGGTCGATGTTACCAAGCTTGGAGCAGTGGAAAAGCGTTTATTCATTGACAGGCTCATAAAGCACATTGAGAATGATAACCTCCAACTGCTGCAGAAACTAAGAGAAAGGATGGACAGAGTCAATGTGAAGTTACCTACTGTGGAGATCAAGTACAAGAACCTGAATGTAGGAGCAGAATGTGAGGTTGTTCAAGGGAAGGCACTCCCAACTCTATGGAACTCTTTTTCTAGCACATTTTCTGGTTTCATGAAGACTATATCGTGTAATTCTCAAGGAGCAGAGATAAGCATTCTGAATGATGTCAGTGGCATCGTTAAGCCATCAAGGCTTACTCTTCTTCTTGGTCCACCAGGCTGTGGGAAAACAACCCTGTTAAAGGCACTGGCTGGAAAACTAGAGCAGTCTCTCAAGGTTTCTGGAGAAATCTCTTACAATGGTTACAAGCTAGACGAATTTGTTCCTCAAAAATCATCAGCTTACATAAGCCAGTATGACCTGCACGTCCCAGAGATGACTGTGAGAGAAACAATTGACTTTTCGGCTCGCTGTCAGGGAGTTGGAAGCAGAGCTGATATAGTGGCTGAAATCACCAGGAGGGAAAAAGAAGAAGGAATCATCCCCGACGCAGATATTGATACCTATATGAAGGCAATTTCAGTTGAAGGACAGAGCGAAAATCTTCAAACAGAATATGTTTTAAAGATTCTCGGACTGGATATCTGTGCTGACATATTGGTAGGTGATGCACTAGATAGAGGCATTTCAGGTGGACAGAAGAAAAGACTAACTACAGGAGAGATGATCGTGGGTCCTATAAAAGCTCTTTTTATGGATGAAATATCAACTGGCTTGGACAGCTCCACAACCTTTCAAATAGTTACATGTCTCCAGCAATTGGTGCACATAACAGATGCAACTGCAGTACTTTCTCTCCTTCAACCAGCACCGGAAACTTATGAGTTGTTTGATGATCTTATATTGATGGCTGAGGGTAAAATAGTATACCATGGCCCCCGCAGTCAAGCACTCCAATTTTTTAAGGATTGTGGTTTCTGGTGTCCTGAAAGAAAAGGAGTTGCAGACTTTCTTCAAGAGGTAATCTCTAAGAAGGATCAAAGGCAATACTGGTACCGCACAGATATTCCTTACAGATATATTTCAGTGGATGAATTCTCTCAAATATTCATATCAAGTTATTGGGGAAGAATGTTAAGTGATGAGCTCTCACAGCCAAACGATAAATCTGAATCCCATAAAAGAGCTTTATCATTTAGCAAGTACTCTCTGGGAAAATTGGATTTGTTTACAGCTTGTATGAAAAGGGAGATTCTCCTCATGAAACGAAATTCATTTATCTATGTGTTTAAAACTGTACAGCTTACAATCACAGCAATCATAACAATGACAGTCTTCTTACGCACTCAGAGGGATGAGGACTTGATAGGTGCAAACTATTTATTGGGTTCATTGTACTATACACTTGTCCGCCTCATGACTAATGGAGTTGCAGAATTGATCATGACTATTACTAGACTCCCTGTTGTTGATAAACAGACGGAATTCTATCTCTATCCAGCTTGGGCATACTGCCTTCCATCTGCAATTCTAAAGATTCCATTTTCAGTACTTGATTCTATTGTTTGGACATCAGTAACATATTATGTTATAGGCTACAGCCCTGAAATAACAAGGTTCCTCCGCCAGTTTCTTTTGCTTGTTACTTTGCATATGTCATCCACCTCCATGTGTCGTTTCCTGGCTTCAGTTTTCAAAACTGATGTTGCAGCTACAACTGTTGGTTCCTTGGTCCTAGCACTGATGTTCTTGTTTGGAGGCTTTATTCTTCCTCGGCCATCACTACCACGGTGGTTGAGGTGGGGATTTTGGCTTTCTCCAATGTCATATGGGGAAATTGGAATAACACTAAATGAATTTCAAGCTCCTCGCTGGCAAAAGATCCAAGAGGGAAATATCACAGTAGGGAAGGAGGTTCTTAGTAGTCACGGTTTAGACTTTGACAGTAACTTCTATTGGATATCAGTTGGAGCCCTACTTGGTTTCACCATACTGTTTGATTTTGGATTTGTCTTGGCATTAACATACATAAAACAGCCTAAGATGTCTCGAGCTTTAGTCTCAAAAAAGAAGCTCTCTCAGCTAAATGAACAAGGAAGAAGTGATAGTGTGGAACTGAAGTCAGTTACCGTTGATATTGGCCACACACCAAGGGGAAATCAAAGCACAGGGAAAATGGTCCTTCCCTTTGAGCCATTGTCAATAGCATTTAAGGATGTCCAGTACTTTGTTGATGTTCCACCGGAGATGAAAAAACATGGTTCCGATGAGAAAAGGCTACAATTGCTCCGTGATATCACTGGAGCTTTTAGGCCAGGAGTTCTCACTGCACTGATGGGGGTCAGTGGAGCAGGGAAGACAACTCTAATGGATGTTCTTTCCGGAAGAAAAACTGGAGGTATCATTGAAGGAGAAATAAGAATTGCAGGATACCCTAAAGTACAAAAGACATTTGAAAGAGTTTCAGGTTACTGTGAGCAGAATGACATACATTCTCCATATATAACCATTGAAGAATCTGTCAAATACTCAGCTTGGTTGCGATTGCCAACAGAAATTGATTCAGCCACAAAAGGGAAATTTGTTGAAGAAGTCCTTGAAACAATTGAACTTGACAGTGTAAAGGATTGCTTAGTTGGCGTACCTGGCCAAAGTGGCTTATCTACCGAGCAACGTAAAAGACTAACCATTGCAGTGGAACTTGTTTCCAATCCATCAATAATATTCATGGATGAACCTACATCTGGTTTGGATGCTCGAGCAGCTGCAGTTGTTATGCGTGCAGTGAAGAATGTTGTTGCCACTGGCAGAACCACTGTTTGCACTATACACCAACCAAGCATCGACATATTTGAGACTTTTGATGAGTTGATTCTAATGAAATCTGGTGGACAGATTATTTATAGTGGAATGCTAGGCCATCATTCAAGTAGACTGATTGAATATTTTCAGAATATACCTGGGGTGCCAAAGATCATGGACAATTATAATCCTGCAACCTGGATGTTGGAAGCTACCTCTGCATCTGTAGAAGCAAAACTCAAAATAGATTTTGCTCAAATATATAAGGAGTCACACCTTTACCAGGATACCCTTGAAGTGGTAAGAGTGTTAAGTGAACCAGCACCAGGTTCGACAGACCTACATTTCTCAACTAGATTCCCACAAAATAGCTTGGGACAGTTCATGGCATGCTTATGGAAGCAACACTTGTCCTATTGGAGAAGTCCTGAGTACAACTTAACACGTTTCATATTCATGATTGTTTGTGCAATAATATTTGGAGCAGTATTTTGGCAGAAAGGGAATGAAATAAACAATCAGCAGGATTTGTTCAACGTACTTGGATCCATGTATATTGCTGTAATATTCTTGGGTCTAAATTACTGCTCTACAATTCTGCCATATGTGGCTACTGAGCGTGCTGTTTTGTACCGAGAAAAGTTTGCTGGAATGTATTCTTCCACTGCTTATTCATTTGCACAGGTGGCCATTGAAATACCATATATCTTAGTGCAATCAATTTTATATGTGGCCATCACATATCCAATGATAGGTTTCCATTGGTCAGTTCAGAAAGTGTTTTGGTACTTCTACACCACATTCTGTACATTTTTGTACTTTGTATACCTTGGAATGATGATAATGTCAATGAGCTCGAATCTCGACATAGCATCTGTATTGTCAACCGCAGTCTACACCATATTCAATCTCTTTTCTGGATTTCTCATGCCAGGACCGAAAATTCCTAAATGGTGGGTTTGGTGCTACTGGATTTGTCCTACTGCTTGGTCCTTGAATGGCCTCCTAACTTCACAATATGGAGATTTGGAGAAGGAGGTAACAGTCTTTGGGAAGCGCCAATCAGTTGGTTCCTTTTTACGAGATTACTATGGTTTCCGGCATGACAGATTAAGCCTTGTGGCTGTGGTGCTCATTGCTTACCCAATTGTTTATGCTTCTCTGTTTGCTTATTTCATAAGGAAAATGAATTACCAAAAGAGATAA 4320 0.409 MELTPRGRTQGHVLTFERDADSFVEEDKELQSKWAAIEKLPTFKRIKTSFVDITQEDTGSSSRETVEKFGAWRSSSKRVVDVTKLGAVEKRLFIDRLIKHIENDNLQLLQKLRERMDRVNVKLPTVEIKYKNLNVGAECEVVQGKALPTLWNSFSSTFSGFMKTISCNSQGAEISILNDVSGIVKPSRLTLLLGPPGCGKTTLLKALAGKLEQSLKVSGEISYNGYKLDEFVPQKSSAYISQYDLHVPEMTVRETIDFSARCQGVGSRADIVAEITRREKEEGIIPDADIDTYMKAISVEGQSENLQTEYVLKILGLDICADILVGDALDRGISGGQKKRLTTGEMIVGPIKALFMDEISTGLDSSTTFQIVTCLQQLVHITDATAVLSLLQPAPETYELFDDLILMAEGKIVYHGPRSQALQFFKDCGFWCPERKGVADFLQEVISKKDQRQYWYRTDIPYRYISVDEFSQIFISSYWGRMLSDELSQPNDKSESHKRALSFSKYSLGKLDLFTACMKREILLMKRNSFIYVFKTVQLTITAIITMTVFLRTQRDEDLIGANYLLGSLYYTLVRLMTNGVAELIMTITRLPVVDKQTEFYLYPAWAYCLPSAILKIPFSVLDSIVWTSVTYYVIGYSPEITRFLRQFLLLVTLHMSSTSMCRFLASVFKTDVAATTVGSLVLALMFLFGGFILPRPSLPRWLRWGFWLSPMSYGEIGITLNEFQAPRWQKIQEGNITVGKEVLSSHGLDFDSNFYWISVGALLGFTILFDFGFVLALTYIKQPKMSRALVSKKKLSQLNEQGRSDSVELKSVTVDIGHTPRGNQSTGKMVLPFEPLSIAFKDVQYFVDVPPEMKKHGSDEKRLQLLRDITGAFRPGVLTALMGVSGAGKTTLMDVLSGRKTGGIIEGEIRIAGYPKVQKTFERVSGYCEQNDIHSPYITIEESVKYSAWLRLPTEIDSATKGKFVEEVLETIELDSVKDCLVGVPGQSGLSTEQRKRLTIAVELVSNPSIIFMDEPTSGLDARAAAVVMRAVKNVVATGRTTVCTIHQPSIDIFETFDELILMKSGGQIIYSGMLGHHSSRLIEYFQNIPGVPKIMDNYNPATWMLEATSASVEAKLKIDFAQIYKESHLYQDTLEVVRVLSEPAPGSTDLHFSTRFPQNSLGQFMACLWKQHLSYWRSPEYNLTRFIFMIVCAIIFGAVFWQKGNEINNQQDLFNVLGSMYIAVIFLGLNYCSTILPYVATERAVLYREKFAGMYSSTAYSFAQVAIEIPYILVQSILYVAITYPMIGFHWSVQKVFWYFYTTFCTFLYFVYLGMMIMSMSSNLDIASVLSTAVYTIFNLFSGFLMPGPKIPKWWVWCYWICPTAWSLNGLLTSQYGDLEKEVTVFGKRQSVGSFLRDYYGFRHDRLSLVAVVLIAYPIVYASLFAYFIRKMNYQKR* 1440
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1248 1439 Pfam ABC-2 type transporter 392 470 IPR043926 GO:0140359
Pvu3g1248 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 839 1092 IPR003439 GO:0005524
Pvu3g1248 1439 PANTHER DRUG RESISTANCE TRANSPORTER-LIKE ABC DOMAIN PROTEIN 2 1439 - -
Pvu3g1248 1439 Pfam ABC-2 type transporter 513 724 IPR013525 GO:0016020|GO:0140359
Pvu3g1248 1439 Pfam ABC-2 type transporter 1165 1377 IPR013525 GO:0016020|GO:0140359
Pvu3g1248 1439 SMART AAA_5 186 411 IPR003593 -
Pvu3g1248 1439 SMART AAA_5 876 1068 IPR003593 -
Pvu3g1248 1439 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 162 434 IPR003439 GO:0005524
Pvu3g1248 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 434 IPR027417 -
Pvu3g1248 1439 Pfam ABC transporter 177 359 IPR003439 GO:0005524
Pvu3g1248 1439 Pfam ABC transporter 867 1019 IPR003439 GO:0005524
Pvu3g1248 1439 Gene3D - 162 427 IPR027417 -
Pvu3g1248 1439 Gene3D - 853 1085 IPR027417 -
Pvu3g1248 1439 CDD ABCG_PDR_domain1 173 416 IPR034001 -
Pvu3g1248 1439 PANTHER ATP-BINDING CASSETTE TRANSPORTER 2 1439 - -
Pvu3g1248 1439 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 864 1074 IPR027417 -
Pvu3g1248 1439 CDD ABCG_PDR_domain2 836 1074 IPR034003 -
Pvu3g1248 1439 Pfam Plant PDR ABC transporter associated 729 791 IPR013581 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1248 Pvu-Chr3 29929108 29938609 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1248 864 1051 Calmodulin-binding Proteins AT2G36910 27.404 2.47e-07 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1248 K08711 - gmx:100779615 2652.47