Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1223 ATGAACTCAATGGTTTGGCCAAAAAAGTCCACTTTAGTAGTAGCAGTTTTCAAGAAGAACATCATCAATGTTATTCTGATTCTCCCTTTCCTATGTTTCTTTCTTCTGAGTACTTCCTTCATTAAAGCTTCTGCATTAAATGCAACCTATGAGTCTGATAGAATAATCGATCTTCCTGGTCAACCTTCCAGCCCCTCACTATCACACTTTTCAGGTTACATCACTGTCAATGAAAACCATGGAAGGGCCCTTTTCTACTGGTTCTTTGAAGCTCAGTCTGAACCCTCCAAGAAGCCTCTCCTTCTCTGGCTCAATGGAGGACCTGGATGCTCCTCTATTGGGTATGGTGCCGTTGTTGAGATTGGACCTCTTATAGTCAATAAAAACGGGGAAGGACTACTTTTCAACAAATATTCTTGGAATCAAGAAGCAAATTTGTTGTTTGTGGAGTCCCCTGTTGGAGTTGGATTTTCTTATACTAACACCTCTTCTGACACCATATTAGAGGATAACTTTGTCGCTGAGGATGCCTACAATTTCTTGGTGAATTGGCTAGAAAGATTCCCACAGTTCAAATCCCGGGACTTTTTTATATCAGGAGAAAGCTACGGAGGACACTATATCCCTCAGCTTGCAGAGTTAATCTTTGATCGAAACAAAGATAGCAACATTTACCCCTTTATTAATCTTAAAGGTTTTATTGTTGGTAACCCAGAGACTGATGACTACTATGACTATAAAGGACTTCTGGAATATGCATGGAGCCACGCAGTTATATCAGACCAGCAATATGAGAAAGCAAAACAAGTATGTGATTTTAAACAATTTGAATGGTCAAATGAATGCAACAGGGCCATGAACGAAGTCTTCCATGATTACTCAGAAATTGACATATACAACATTTATGCCCCGAGATGTCCTTTAAACAGCACATCCTCAATAGCTGATGAGAGCAACAGTATCGGCCATGAATTATTTACCAAGGTGAGAAATGATCATAGAGAAAGGAGGATGAGAATTTTTGGAGGCTATGACCCTTGTTTTTCCAATTATGCAGAAGAATATTTCAATAGAAAAGATGTTCAATCATCTTTTCATGCAGATACTAAAAGAGCCACTAACGTGGCATGGAAGGTTTGCAACAATTCCATATTGAGGGCTTACAACTTCTCTGTTTTCTCGGTCCTACCTATATACACCAAACTCATCAAGGGTGGGCTTAAGATATGGATTTACAGTGGAGATGCAGATGGGAGAGTGCCGGTTATAGGGACACGATATTGTGTTGAGGCTCTGGGATTACCTCTCAAGTCTAGGTGGCAAACATGGTACCATGATAACCAGGTTGGAGGAAGAATAGTGGAATATGAAGGACTGACATATGTGACAGTGAGAGGGGCTGGTCACTTGGTGCCATTGAACAAGCCCACTCAAGCTCTCTCCCTTGTTCATTCTTTCTTAACAGGCAACCATCTTCCTACTCGTGGATAA 1491 0.4071 MNSMVWPKKSTLVVAVFKKNIINVILILPFLCFFLLSTSFIKASALNATYESDRIIDLPGQPSSPSLSHFSGYITVNENHGRALFYWFFEAQSEPSKKPLLLWLNGGPGCSSIGYGAVVEIGPLIVNKNGEGLLFNKYSWNQEANLLFVESPVGVGFSYTNTSSDTILEDNFVAEDAYNFLVNWLERFPQFKSRDFFISGESYGGHYIPQLAELIFDRNKDSNIYPFINLKGFIVGNPETDDYYDYKGLLEYAWSHAVISDQQYEKAKQVCDFKQFEWSNECNRAMNEVFHDYSEIDIYNIYAPRCPLNSTSSIADESNSIGHELFTKVRNDHRERRMRIFGGYDPCFSNYAEEYFNRKDVQSSFHADTKRATNVAWKVCNNSILRAYNFSVFSVLPIYTKLIKGGLKIWIYSGDADGRVPVIGTRYCVEALGLPLKSRWQTWYHDNQVGGRIVEYEGLTYVTVRGAGHLVPLNKPTQALSLVHSFLTGNHLPTRG* 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1223 496 SUPERFAMILY alpha/beta-Hydrolases 51 493 IPR029058 -
Pvu3g1223 496 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 26 30 494 - -
Pvu3g1223 496 ProSitePatterns Serine carboxypeptidases, histidine active site. 459 476 IPR033124 GO:0004185
Pvu3g1223 496 Pfam Serine carboxypeptidase 59 488 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 ProSitePatterns Serine carboxypeptidases, serine active site. 198 205 IPR018202 GO:0004185
Pvu3g1223 496 Gene3D - 347 384 - -
Pvu3g1223 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 136 148 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 159 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 184 209 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 PRINTS Carboxypeptidase C serine protease (S10) family signature 459 472 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 30 494 IPR001563 GO:0004185|GO:0006508
Pvu3g1223 496 Gene3D alpha/beta hydrolase 47 316 IPR029058 -
Pvu3g1223 496 Gene3D - 395 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1223 Pvu-Chr3 29435875 29438757 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1223 352 492 Calmodulin-binding Proteins AT2G22960 26.761 9.09e-13 65.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1223 3 29435875 29438757 Pvu3g1223 3 29435875 29438757 ECH