Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1213 ATGATAAACAAGGGTTGTGATGCTTCAGTCTTGCTGGATGACACACAGGACTTTGTTGGTGAGAAAACTGCAGGTCCAAATTTGAATTCTCTCAGAGGATTTGAAGTGATCGACAAAATCAAATCTGAGCTGGAACTAATCTGTCCACACACTGTCTCTTGTGCTGACATACTGGCAACTGCTGCAAGAGATTCGGTTCTTCTGTCAGGAGGTCCAATTTGGGAGATGCAAATGGGAAGGAAAGATAGCATTACTGGTAGCAAGGATGCAGCAAATAATAACATCCCAGGCCCAAACTCCACTGTTGATGTGCTGCTAGCCAAGTTCGAGAATGTAGGCCTTACACTTAAAGACATGGTTGCACTTTCAGGTGCGCACACAATTGGGAAAGCCCGCTGTACAACATTCAGCTCTCGATTACAGAGTAGTAGCGACTCAGAAAACATTGACTTCATCTCATCACTACAACAGTTGTGCTCGGGAGCAGATAATGGTAACATAGTTGCACATCTTGACTTGGCTACACCTGCTACCTTTGATAACCAATACTTCGTTAATCTTCTCTCTGGGGAGGGATTGCTCCCATCAGACCAGACTCTTGTGAATGGAAATGATCAGACACGAGAGATTGTGGAAAACTATGTGGAGAACCCATTAGCTTTCTTTGAGGACTTCAAGCATTCAATGTTGAAAATGGGAAGCTTGGGATCACCAAGTAATGGCCAGATTCGTAGGGACTGCCGAACTGTTAACTAG 756 0.4431 MINKGCDASVLLDDTQDFVGEKTAGPNLNSLRGFEVIDKIKSELELICPHTVSCADILATAARDSVLLSGGPIWEMQMGRKDSITGSKDAANNNIPGPNSTVDVLLAKFENVGLTLKDMVALSGAHTIGKARCTTFSSRLQSSSDSENIDFISSLQQLCSGADNGNIVAHLDLATPATFDNQYFVNLLSGEGLLPSDQTLVNGNDQTREIVENYVENPLAFFEDFKHSMLKMGSLGSPSNGQIRRDCRTVN* 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1213 251 PANTHER PEROXIDASE 72-RELATED 4 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PANTHER PEROXIDASE 40 4 250 - -
Pvu3g1213 251 PRINTS Plant peroxidase signature 32 45 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 51 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 70 85 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 117 129 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 170 185 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 186 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Plant peroxidase signature 227 240 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Haem peroxidase superfamily signature 52 69 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Haem peroxidase superfamily signature 70 82 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Haem peroxidase superfamily signature 118 133 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 PRINTS Haem peroxidase superfamily signature 172 187 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 SUPERFAMILY Heme-dependent peroxidases 4 251 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 Gene3D Peroxidase, domain 2 96 232 - -
Pvu3g1213 251 Pfam Peroxidase 4 216 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 ProSitePatterns Peroxidases proximal heme-ligand signature. 118 128 IPR019793 -
Pvu3g1213 251 Gene3D - 4 251 - -
Pvu3g1213 251 ProSiteProfiles Plant heme peroxidase family profile. 4 251 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1213 251 CDD secretory_peroxidase 5 250 IPR033905 GO:0004601|GO:0042744
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1213 Pvu-Chr3 29212353 29214624 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1213 5 251 Peroxidase AT4G16270 61.660 1.32e-111 323
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1213 K00430 - gmx:100787637 434.876