Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1205 ATGGCATCATCATCGTCATCAGCACCAGCATCGTCAATGATCACAAACCCGACAACGGCGAGCACGGAGCGGTCACGTGATGTGAAGAGAAGAAAGAAGAAGAAAGCACAGGAACGAGATGATGAGAAGCAGCCCAAGTGGAAATCCCAAGCGCAGCAACAAATCTACTCCTCCAAGCTGCGCCAAGCCTTAGCCAGAGTCAACCTCGGCTCTGCGCCGCCAAAAGGCAAAGCCGTGCGCGAAGCCGCCGACAGAGTTCTCGCCGTGACGGCCAAGGGGAGGACGCGCTGGAGCCGAGCCATCCTCACCAACCGGCTCAAGCTCAAGTTCACCAAACACAAGAGACAGAGAGTGGCAACGACGCCCCCTAGCCGGTCAAAGAGAGCTCGCGTCAGCGTTCACCGGCTGGAGGGGAAGAGTGGAACGAGTGTGCAGAGGAAAGTGAGGTTCCTGGGACGGTTGGTTCCCGGTTGCCGAAAAGAACCGTTACCGGTTGTTCTGGAAGAAGCAATCGATTACATACCCGCGCTTGAGATGCAGGTTCGAGCCATGAACGCTCTCTTTAACCTTCTCTCCGCCGCTTCTTCTTCTTCTTCTCCTCCTCCTCCTTCTTCCTCATAA 621 0.5588 MASSSSSAPASSMITNPTTASTERSRDVKRRKKKKAQERDDEKQPKWKSQAQQQIYSSKLRQALARVNLGSAPPKGKAVREAADRVLAVTAKGRTRWSRAILTNRLKLKFTKHKRQRVATTPPSRSKRARVSVHRLEGKSGTSVQRKVRFLGRLVPGCRKEPLPVVLEEAIDYIPALEMQVRAMNALFNLLSAASSSSSPPPPSSS* 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1205 206 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 145 196 IPR036638 GO:0046983
Pvu3g1205 206 MobiDBLite consensus disorder prediction 1 22 - -
Pvu3g1205 206 PANTHER TRANSCRIPTION FACTOR IBH1-LIKE 1 16 199 IPR044660 GO:0006355
Pvu3g1205 206 MobiDBLite consensus disorder prediction 1 55 - -
Pvu3g1205 206 PANTHER MYC-TYPE, BASIC HELIX-LOOP-HELIX (BHLH) DOMAIN-CONTAINING PROTEIN-RELATED 16 199 - -
Pvu3g1205 206 CDD bHLH_AtIBH1_like 135 187 IPR044549 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1205 Pvu-Chr3 28958078 28959067 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1205 42 202 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G06590 55.000 7.00e-52 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1205 - - gmx:100803765 266.159
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1205 3 28958078 28959067 Pvu6g1244 6 23403993 23405163 PCT