Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1183 ATGGTTGACACTTTCAGTGTAGAGAGCAGGGTTCATATAAGAGAGTTTGATGAAGATAGAGATGTTAAGGTGGTGGGGAAGCTTGAGAGGAAGTGTGAGATTGGGACTAAAAAGGGGGTCTCCATTTTCACCAACATGATGGGTGACCCTTTATCTAGGATTAGGTTCTATCCCCTTCATGTTATGTTGGTGGCTGAGCTGCTTGAAAGCAAGGAGCTTGTGGGTGTGGTTCGAGGGTGCATTAAGAGTATGAGAACTCCTTCTGAATCATTGCTGAAGATAGGTTGCATACTAGGCCTTAGGGTCTCTCCTTCACACAGGAGAAAGGGGATTGGACTAAAACTTGTGACCTCAGTTGAAGAATGGATGCTGAGAAATGGGGCTGAATATGCACTCTTGGCCACTGAAAAGAAAAACGATGCCTCTAGAAACCTATTTACCAACAAATGCAAATATGTGAGCCTCAGCTCGTCACTTTTCATATTTGTGCATCCAATTAGTTTCCCTGCAAAGAACATTTCCAAAGATATAGAAATTGAGAAGGTAAACATAGACCAGGCAATTTCCTTATACAGGAGAACCCTGAGGGCCAAAGAGTTGTATCCATTAGACATGGATAGTATTTTGAAGGAGAATCTCAGCTTGGGCACCTGGGTGAGTTATTACAAAGAGGGAGGCTTACTCAACTTACAGAGAAAGGAAGAGAGTGAAGACATTATTACCAACGAAATCACAAGCTCATGGATCATCTTTAGCATATGGAATACTTATGAGGCTTATAAGCTTCAACTTAAAAAGTCTCAGCCACTTAGGTTTCTTCACACAACTTTAAATCATGCAAGAGACAAAATTTTCCCTTGTCTGAGAATGTCGGTGAGTGACTCACTCTGCAGACCCTTTGGGTTTCTCTTCCTCTATGGGCTCCACGGAGAGGGAGAGAACCTTGGGGAGCTAATGGAATTCATATGGAGGTTCACATCAAGGATGGGAGAAAGTTTGAAGGACTGCAGAGTGGTTATAACCGAGCTAGGGTTTGGGGATCCACTTGTAAACCATGTCCCTCAAACAGCTTCTATGTCGTGTATCGATGATATTTGGTACACCAAAAGAATTTCAAGCCACGGTGACGAAAAGGATGATGAACTGCTGATTAAGAGACAAATCGGGAATGTGTTTGTTGACCCTAGAGATTTTTAG 1197 0.4261 MVDTFSVESRVHIREFDEDRDVKVVGKLERKCEIGTKKGVSIFTNMMGDPLSRIRFYPLHVMLVAELLESKELVGVVRGCIKSMRTPSESLLKIGCILGLRVSPSHRRKGIGLKLVTSVEEWMLRNGAEYALLATEKKNDASRNLFTNKCKYVSLSSSLFIFVHPISFPAKNISKDIEIEKVNIDQAISLYRRTLRAKELYPLDMDSILKENLSLGTWVSYYKEGGLLNLQRKEESEDIITNEITSSWIIFSIWNTYEAYKLQLKKSQPLRFLHTTLNHARDKIFPCLRMSVSDSLCRPFGFLFLYGLHGEGENLGELMEFIWRFTSRMGESLKDCRVVITELGFGDPLVNHVPQTASMSCIDDIWYTKRISSHGDEKDDELLIKRQIGNVFVDPRDF* 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1183 398 Gene3D - 12 155 - -
Pvu3g1183 398 Pfam Acetyltransferase (GNAT) family 65 150 IPR000182 GO:0016407
Pvu3g1183 398 CDD NAT_SF 62 133 - -
Pvu3g1183 398 PANTHER N-ACETYLTRANSFERASE HLS1-LIKE ISOFORM X1-RELATED 3 398 - -
Pvu3g1183 398 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 3 398 - -
Pvu3g1183 398 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 11 210 IPR000182 GO:0016407
Pvu3g1183 398 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 9 147 IPR016181 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1183 Pvu-Chr3 28538083 28539739 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Pvu3g1183 Acetyltransf_1 1.8e-13 CL0257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1183 - - gmx:100792925 697.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1183 3 28538083 28539739 Pvu3g1183 3 28538083 28539739 ECH
Pvu3g1183 3 28538083 28539739 Pvu6g1232 6 23252641 23254432 PCT