Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1165 ATGGCAAAGTCGAAGAACCACACCGCTCACAACCAGTCCTACAAGGCCCACAAGAATGGCATCAAAAAGCCAAAGAGGCATCGCCACACTTCCACCAAAGGGATGGATCCCAAGTTTTTGAGGAACCAGAGGTATGCGAGGAAGCATAACAAGAAGAGTGGTGAAACAGCCAGTGAAGAAGAGTAA 186 0.4839 MAKSKNHTAHNQSYKAHKNGIKKPKRHRHTSTKGMDPKFLRNQRYARKHNKKSGETASEEE* 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1165 61 MobiDBLite consensus disorder prediction 1 32 - -
Pvu3g1165 61 Gene3D - 1 61 - -
Pvu3g1165 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pvu3g1165 61 Pfam Ribosomal L29e protein family 3 42 IPR002673 GO:0003735|GO:0005840|GO:0006412
Pvu3g1165 61 PANTHER 60S RIBOSOMAL PROTEIN L29 1 61 - -
Pvu3g1165 61 MobiDBLite consensus disorder prediction 1 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1165 Pvu-Chr3 28219529 28220353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1165 1 61 Cytoplasmic Ribosomal Protein Gene Family AT3G06700 86.885 2.41e-34 109
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1165 K02905 - gmx:100803210 130.183
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1165 3 28219529 28220353 Pvu3g1165 3 28219529 28220353 ECH
Pvu3g1165 3 28219529 28220353 Pvu9g2632 9 36772492 36773309 PCT