Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1152 ATGTTTGACTGGACCTCAAAATCACGGAAGAAATTATTTACAACCACGCCGGAGTCCTTGAAACAAAGAAGAAAAGTTGATGGCAACTTGGCAACGATGCTTACCTATCTGGTGGACGAAGATGGTGAAATTGGAATAGGGGGAAGTAGTAGAGATAGTGCTGATCATAGCTGTGCTACATCTGTTATAGATTCTGAAGTATGTGGAACAAGGGCCCCTGGTGTAGTTGCCAGGCTTATGGGATTAGATTCATTGCCCTCTTCCAGTTTTTCTGATCCACATTCTACTCCATCTTATGACAGCCAATGCATTCAAGATGTTAAGTACTGGAGCAATCATCTTCATGACCATCAGATCCTATATTCTGGAAAGTTGGTTGAAAAAGCTGAGGGGACTTCTAGGAACTTCATGGAGGCAAATCCTCTACATACCCGTAGCAGGCCGATTGAAAAGTTTCAAACAGAAGTAATGCCTCCCAAATCAGCTAAATCTATTCCCTTTACACACCATAAACTTTTCTCCCCAATTAAAAACCCTCGTTTTGTTCCATCAAATAATGCTACATACATAATGGAAGCTGCAGCAAGAATTATTGAACCTGGACGCCAAGCTGCTACAAAGGCTAAAACACCTCTGGTAGCATCATCAACAGTATCATTGAGGGTTAGAGACCTTAAAGAAAAAGTGGAGGCTTCACAAAAGCGACAACTAATTAGTTCATCTTCATTAGTTAGAGATACAAAAGGAAAAAGAGAAACCTCTCTTAGAACTACCAGGCTTTCTGAATCTTCTCAAAGGTTGACTGAGTCTAATGATGCCAAATATCTAAAAGGACAATCTTTGAACAAAAGTTGGAATGGACTTGTAGATACACTTGTAAGATCGTCTACTCAAGTAGAAGAAGAAGATTGTTATTCGAAAAATAAAGGGAAGTCTATATCACTTGCAATCCAAGCAAAAGTGAATGTCCAAAGAAGGGAAGGCTTGAGTTTTAGTAGTGGAAAAAGTTTGGTGGAGCAGAGAGAACAATGTGACACTAAAAATTCCCAGAAGCCTCTGAAGGCTAATGTTCAAAAAAGTTTGCACGTGAAATCCTCTGGTCAAGATGCTTCTGGTGTTCTCAGGCAGAATAATCAGAAACAGAATTGTTCAATGGATAGAGACAAACTTCCATCAAAGCCATTGATTTCCAATTCACAAGGTAGAAAAGTTGTGACTGGGGATTCCTCAGGTGGACGACATAGAAGCTCTAGCAATAAATCCATTGCAAAATCTAAAGTTGGGCCCAAAAATTCATCAACGAGTGTGACAGATAGTGAAAAGGAAGTCTTGTATACTCGTACAAACAATTTCCCAAGGAAGAAGAGGTCCACAGACAGGGACTGGAATGGTAGGGTTGTTGATAATTTATTCATTGACAAATCACAGAAGCCTGTTCAGTCTAATCTAGTTGGTAATAAATACCATGGTGGGGCTGAAGAAGTAAAAAAGAAAGACACGGATGTAGTTTCCTTCACATTTAGCATGCCATTGACAAGAATCAATTCTGGTTTTGAGACATCTGGCCTAAATTCCATGGATCAGCATATGAGAAGAGTGTTCGTTGATACTGAAACTGACAATGCAGGGTCTCCAGTAGGATACAATGCAATTGGTGGTGATGCCTTAGGTATTCTCTTGGATCAGAAGTTGAGGGAGTTAACATATGGAATTGGGAACTCTTGTGACGACTCGCTCGAAGCAAGCTCACCTTCCAGTACTGCACCAAAATCAAAAGATCTGGTTCCCACTCTTAATTCAGTTAACCTCTTTCCACAGTTGCAACAGAAGAAAGACATGATGTTGACAGATAAGTTATTCAGTAACCGTACCTGTCTTCCAGAATTATCATCCCAGCATAGGCTTCGGCTTCATGAGATGGAGGAGTATGATATCAATCCTATGGAAGCAGAGTTATTCAATTCAGGACAGCCGAGTCCAATGTCTGTTCTTGACCCTTCTTTTTCTACTGAAAGCTGTGAATCTCCATTCAGCGCAAATGCTACCAGTTCAGAAGACCAAAAAAGGAGGAAGCAAGTTGTGAGCTCAGGAAGTGGCTATACAGACTTGTTTGATTCAGCATCAGCTTGGACCATGCCAAGGAAACAATCAAGTACATGTTCCCAAATGAAGTTTGGACAATCAAGTACATGGGAGTTAAACTATGTAAATGATATATTGTGTAATGTGGAGTTGATGTACATGGACTTTTCTCTTGGCAGAGCTCGTGACATTGTGAACCCTCATCTGTTCAACCAGTTGGAAAATCGAAGGGGAAGGTTTGAGAGTGATGGTGGCGAGTGTAGAATAAGAAGGAAAGCTATATTTGATTGTGTGAGTGAGTGTTTGGACTTGAGATGCAGGCGTTATGTTGGTGGGGGTTACAAAATGTGGGTAAAAGGGGTTGCAATGGTGAGAAGAAATGAGTGGTTGGCAAGGGAAGTGTGGAAGGAAATTTCAAGTTGGAGGGACATGGGGGACTCAATGGTGGATGAACTGGTAGATAGGGACATGAGCATCCAATATGGACAATGGCTAGATTTTGAGGTTGATACTTTTCAACTTGGTGCAGTGGTTGAAGACCAAATATTTGATTCTTTGGTTGATGACTTTGTTGCTGAAATCCTGCAATTGTAA 2676 0.4077 MFDWTSKSRKKLFTTTPESLKQRRKVDGNLATMLTYLVDEDGEIGIGGSSRDSADHSCATSVIDSEVCGTRAPGVVARLMGLDSLPSSSFSDPHSTPSYDSQCIQDVKYWSNHLHDHQILYSGKLVEKAEGTSRNFMEANPLHTRSRPIEKFQTEVMPPKSAKSIPFTHHKLFSPIKNPRFVPSNNATYIMEAAARIIEPGRQAATKAKTPLVASSTVSLRVRDLKEKVEASQKRQLISSSSLVRDTKGKRETSLRTTRLSESSQRLTESNDAKYLKGQSLNKSWNGLVDTLVRSSTQVEEEDCYSKNKGKSISLAIQAKVNVQRREGLSFSSGKSLVEQREQCDTKNSQKPLKANVQKSLHVKSSGQDASGVLRQNNQKQNCSMDRDKLPSKPLISNSQGRKVVTGDSSGGRHRSSSNKSIAKSKVGPKNSSTSVTDSEKEVLYTRTNNFPRKKRSTDRDWNGRVVDNLFIDKSQKPVQSNLVGNKYHGGAEEVKKKDTDVVSFTFSMPLTRINSGFETSGLNSMDQHMRRVFVDTETDNAGSPVGYNAIGGDALGILLDQKLRELTYGIGNSCDDSLEASSPSSTAPKSKDLVPTLNSVNLFPQLQQKKDMMLTDKLFSNRTCLPELSSQHRLRLHEMEEYDINPMEAELFNSGQPSPMSVLDPSFSTESCESPFSANATSSEDQKRRKQVVSSGSGYTDLFDSASAWTMPRKQSSTCSQMKFGQSSTWELNYVNDILCNVELMYMDFSLGRARDIVNPHLFNQLENRRGRFESDGGECRIRRKAIFDCVSECLDLRCRRYVGGGYKMWVKGVAMVRRNEWLAREVWKEISSWRDMGDSMVDELVDRDMSIQYGQWLDFEVDTFQLGAVVEDQIFDSLVDDFVAEILQL* 892
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1152 891 Pfam DUF761-associated sequence motif 61 91 IPR032795 -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 242 266 - -
Pvu3g1152 891 PANTHER EXPRESSED PROTEIN 1 889 - -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 654 683 - -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 654 694 - -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 349 385 - -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 328 441 - -
Pvu3g1152 891 Pfam Domain of unknown function (DUF4378) 732 883 IPR025486 -
Pvu3g1152 891 PANTHER PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED 1 889 - -
Pvu3g1152 891 MobiDBLite consensus disorder prediction 393 441 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1152 Pvu-Chr3 27879938 27883778 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1152 1 889 TRM (TON1 Recruiting Motif) Superfamily AT5G26910 30.507 3.78e-86 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1152 - - gmx:102660038 1322.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1152 3 27879938 27883778 Pvu9g2624 9 36674885 36680065 PCT