Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1145 ATGCTCCTCCCAATCCACTGTTGCTACCTCACCACCATCCTCGCACTAACAATCTTCTTCTCAACCTCGTCATTTTCCGACGCCCAATCCTGTAACGGCATCCTCGTCTCTTATGCCTACACCAGCGGCTTGCGCCTTCCGCCCAATGTCACCAACGCGGCGGAGCAGCCCTACCGGTTTGAGTCCACGTTGACGGTGCTCAACAATGGTCTCGATGAGCTCAAGTCGTGGAAGGTCTCCGTGGGGTTCGACCACGACGAGTTATTGGTCTCTGCGTCCAATGCGGTGCTCGCAGACGGCACTACCCTCCCCGCCTCCGTCGGAAACGGCACTGTTTTCGCTGGCTATCCCATGACCGATCTCAAGACCGCCGTGGCCACCGCCGGAGACTTGACCCAGATGCAGGTTCAGATCGATCTCGTCGGCACCGTGTTCGGGGTGGCGCCGCCCAGTGTTCCGATGCCGAAATCCATCAGCCTCGCCAATGATGGATTCCTCTGTCGTAAATCCACCACCCAAGGGAAGAATGCTAGTAGTGTGTGCTGCACGAGAGATCCCAAGTTCAAAACTAACATTACCACGGATGAAGAGTTTCTGCCACGTCAGAATGGTGATCTTAGCATTATGTATGACGTGATAAGAACTTACGATTCTAATTACTGGGCTGAGGTTACTATTGGAAACCATAACCCACTTGGGAGGCTTGACAACTGGAGGTTGAGCTGGGACTGGATGAACGATGAGTTTATATATTCAATGAAAGGGGCTTATCCTTCTGTTGTGGATGCTTCTGAATGTCTGTTCGGTAAGCAAGGCACATTCTACAGGGATCTTGACTTTGCCACTGTTTTGAATTGCGAGAGAAGGCCAACCATAATTGATCTCCCTCCCACCAAGTTCAATGATTCTGACCTTGGGAAGATTCCCTTTTGCTGCCGGAATGGTACTATTTTGCCGCCCTCCATGGACCCTAGCATGTCAGCTTCAAGATTCCAAATGCAGGTTTTCAAGATGCCACCAGCGCTTAACCGATCCCAACTTTCACCACCGCAGAACTGGAAGATAAGTGGGATACTCAACCCTGACTATAAATGTGGCCCTCCTGTAAGAGTGAGTCCTACGGAAAACCCTGATCCTTCTGGCTTACCGTCGAACAAAACTGTGATGGCCAGTTGGCAGGTTGTGTGCAATATTACAACAGCCAAGGGAACATCAAGTAAATGCTGTGTTTCATTTTCAGCCTATTACAATGATTCAGTTATTCCATGCAAAACATGTGCTTGTGGATGCCCCCAGAATACAGAGAGAACATGTAGTACCACTGCCCCAGCTATGTGGCTTCCACCAGAGGCACTTCTTGTTCCTTATGAAAACCGAACCGCCAAGGCCATTGCTTGGGCAAGCCTGAAACATCTTCGAGTGCCAACCCAGATGCCCTGTAGTGATAACTGTGGTGTGAGCATCAACTGGCATTTGTACACAGACTACACTAAAGGATGGAGTGCGAGGGTGACACTTTTTAACTGGGGTGACACCAATTTTGCAGACTGGTTTGCTGCAGTACAAATGGATAAAGCAGCTGCAGGTTTTGAGAAAATGTACTCTTTCAACGCAAGTCTTCTAGACGGCGTAAACAACACTATTATTATGCAAGGTTTGCCAGGATTGAACTACCTTGTAGCAGAAGCCGATGGAGCTGACCCTCTGAGAGATCCCAGGGTGCCTGGTAAACAACAGTCTGTGATCTCTTTCACAAAGAAACTTACTCCTGGAATCAATATGGTTCGTGGAGATGGTTTTCCCACTAAAGTCTTTTTCAATGGAGAGGAATGCTCTCTTCCTTCCGTGTATCCAACTAGTGGTGGTTCTTGGAATGGTTTTTCATTGGGTACTTCAATGCTTCTATCCCTGTTGTCGTTCCTCTTGTTACGATGA 1935 0.4889 MLLPIHCCYLTTILALTIFFSTSSFSDAQSCNGILVSYAYTSGLRLPPNVTNAAEQPYRFESTLTVLNNGLDELKSWKVSVGFDHDELLVSASNAVLADGTTLPASVGNGTVFAGYPMTDLKTAVATAGDLTQMQVQIDLVGTVFGVAPPSVPMPKSISLANDGFLCRKSTTQGKNASSVCCTRDPKFKTNITTDEEFLPRQNGDLSIMYDVIRTYDSNYWAEVTIGNHNPLGRLDNWRLSWDWMNDEFIYSMKGAYPSVVDASECLFGKQGTFYRDLDFATVLNCERRPTIIDLPPTKFNDSDLGKIPFCCRNGTILPPSMDPSMSASRFQMQVFKMPPALNRSQLSPPQNWKISGILNPDYKCGPPVRVSPTENPDPSGLPSNKTVMASWQVVCNITTAKGTSSKCCVSFSAYYNDSVIPCKTCACGCPQNTERTCSTTAPAMWLPPEALLVPYENRTAKAIAWASLKHLRVPTQMPCSDNCGVSINWHLYTDYTKGWSARVTLFNWGDTNFADWFAAVQMDKAAAGFEKMYSFNASLLDGVNNTIIMQGLPGLNYLVAEADGADPLRDPRVPGKQQSVISFTKKLTPGINMVRGDGFPTKVFFNGEECSLPSVYPTSGGSWNGFSLGTSMLLSLLSFLLLR* 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1145 644 PANTHER COBRA-LIKE PROTEIN 7 6 643 - -
Pvu3g1145 644 Pfam COBRA-like protein 220 399 IPR006918 GO:0010215|GO:0031225
Pvu3g1145 644 PANTHER COBRA-LIKE PROTEIN 7 6 643 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1145 Pvu-Chr3 27746661 27749302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1145 31 618 COBRA Gene Family AT4G16120 69.036 0.0 873
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1145 - - gmx:100803929 1216.83
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1145 3 27746661 27749302 Pvu3g1145 3 27746661 27749302 ECH
Pvu3g1145 3 27746661 27749302 Pvu9g2617 9 36598132 36600662 PCT