Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1129 ATGCAGAACAAAATAATCTCTCAGATCTATTTTTTTGAATACATTATTTTCAATTTCGGAATAAAGGAAAACCGACCCGACCCAAAGCTAGCTTGTTTTGTTTCCCTCTCTTATTGCGAACGCGAACCCTCTCTTTCTCCTTGCAACTTCCGAGCTTCGACTGTTTGGGTAATGGCTTCAACGGACGTGAGAGGGATTTTGACCGCTTTCAATCCTTCTCAGGACTTCTTCGCTATCACTGCCGGAGACGGTCGCGTCAAGATATGGGACGCGCTGAGTGGCCAGGTCCAAACCGAGTTCGCAGATATTGCATCATCTCATTCAACAACTACTTCACAGCACAAATCCATTAACGGCCATCTTGCACTAGATTATACCTGCATCAAGTGGTTCTCCTTCGAAAGAAAGAGGAAACGGAAGCATGTATCCTCGCTGTTAGTGCTTGGAACTGGTAGTGGTGATGTTTTAGCACTTGATGTTGATGCTGGTCATTTGAGCTGGAGAATTACTGACTGTCATCCCGGAGGTGTGAGAGCCATTGCATCTTCGGCAAACGTGTCAAGCATTTATACAGCTGGTGCAGATGGGATGGTATGTGTGATAGATTTCATGACAGGAAACCTGTTGGAGAAATTTAAAGCTTCTACCAAGGCGGTATCCTGCATGTCTGTTTCTCCAGATGGGAAGACATTAGCTACTGCAGCTGCACAATTGAAGATTTTTAACTGCTCTAATCACAAAAAGATTCAAAAGTTCTCTGGTCATCCTGGTTCTGTTCGATGCATGGTTTTCACCGAAGATGGCAAGTATATCCTCTCATCCGCTGTTGGTGAAAGATATGTTGCTGTTTGGAGGATAGATGGTGCTAAAAAGCAGTCAGCTAGTTGTGTTTTTGCAATGGAGCATCCTGCTGTCTTTCTTGATAGCAGCTGCATTGCTAGCGGGGAGCAAGACAAGACTGGCATATGTGTTTTGGCCATTTCAGAAATTGGCATTTGTTATTTATGGTTTGGTAATAGTATTGAAGAACTGCGTAATGCAAAAGCCACAAAAATATCATTATCTTTGGAAGACATGCCCTCCAAAAATTTCAGAGGAACTCTGCCAGCAATATATGCTGCTAAATTACAAGGCATCCAGAAGCCAGCCTCTGGGCAAGTTTTTCTTGTTTATGGGTTACTTGTAAAGCCATCATTTAGAAAAATTCTTGTGCATTCTGGTACAGATGTAAAGTTGAATGTCTCTCGTGATGGTGTTCTTTTACCAACCAGTCAAGCTCTTGTCAAATCTAAGAAGGGAACAAAGGCACAAACAGTTACTGCACTAGACCGAGCTAATGCTGAGGATGCCTTGCTTCCGATTCCTAAGGTTTTTTCTCATGAGAATGAGAAAGAGAAAGCATTTCAAAAATCTTTGGACAAGGATACAATTGATGATTTGCATAGAAGTAGTAACGATGATTCTGTTGAGATGGAAGATGATGTGGCCCATAGTGAGACTAAGGAACTTTGCATGGAGGACCTGCTAAAATCACTAGGGATTCTTTCCAATGAAAGTGAATATGCATCAAACGTTGAACTTTGCTCTAAGTTGTTGAAGGGTATTGATGTGGAAGCTACTGTTCCAGTGAAAAAGATAAGAGCAGCTGTTTTGTCTATGGAGCGTAGCAAAGCATTCATGCTACTGGAAGCGTTACTGGCTGCATGGGAATCAAGGTCATCTAGTGGAAAGTATATTCTTCCATGGATATACAGCATATTAGTGAATCATGCTCACAATGTCATTGCGGAGGAATCTGATACACTTAAACTTGATTCCTTAGACAAGATTACCAATTTTAGAGGGGCAGCTCTTCAGCCTTTGTTACAATTATCAGGTCGTCTCCAACTGGTGACATCACAGATTGACAAAACCTCTCAGAGTATAAGCCATTCGGTGCATGAACTCCAAACAGAAGAAAGTGAAGAAGATGAAGATGAAACTAAAGATGAATATTATCATGAGGGAGATGATACTTCTGAAATAAGTACTGATGATGAAAGCTAG 2046 0.4159 MQNKIISQIYFFEYIIFNFGIKENRPDPKLACFVSLSYCEREPSLSPCNFRASTVWVMASTDVRGILTAFNPSQDFFAITAGDGRVKIWDALSGQVQTEFADIASSHSTTTSQHKSINGHLALDYTCIKWFSFERKRKRKHVSSLLVLGTGSGDVLALDVDAGHLSWRITDCHPGGVRAIASSANVSSIYTAGADGMVCVIDFMTGNLLEKFKASTKAVSCMSVSPDGKTLATAAAQLKIFNCSNHKKIQKFSGHPGSVRCMVFTEDGKYILSSAVGERYVAVWRIDGAKKQSASCVFAMEHPAVFLDSSCIASGEQDKTGICVLAISEIGICYLWFGNSIEELRNAKATKISLSLEDMPSKNFRGTLPAIYAAKLQGIQKPASGQVFLVYGLLVKPSFRKILVHSGTDVKLNVSRDGVLLPTSQALVKSKKGTKAQTVTALDRANAEDALLPIPKVFSHENEKEKAFQKSLDKDTIDDLHRSSNDDSVEMEDDVAHSETKELCMEDLLKSLGILSNESEYASNVELCSKLLKGIDVEATVPVKKIRAAVLSMERSKAFMLLEALLAAWESRSSSGKYILPWIYSILVNHAHNVIAEESDTLKLDSLDKITNFRGAALQPLLQLSGRLQLVTSQIDKTSQSISHSVHELQTEESEEDEDETKDEYYHEGDDTSEISTDDES* 682
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1129 681 Pfam WD domain, G-beta repeat 65 90 IPR001680 GO:0005515
Pvu3g1129 681 Pfam WD domain, G-beta repeat 248 284 IPR001680 GO:0005515
Pvu3g1129 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 69 99 IPR001680 GO:0005515
Pvu3g1129 681 PANTHER OS03G0300300 PROTEIN 58 680 - -
Pvu3g1129 681 SMART WD40_4 51 90 IPR001680 GO:0005515
Pvu3g1129 681 SMART WD40_4 245 285 IPR001680 GO:0005515
Pvu3g1129 681 SMART WD40_4 205 242 IPR001680 GO:0005515
Pvu3g1129 681 SMART WD40_4 162 202 IPR001680 GO:0005515
Pvu3g1129 681 Pfam Dip2/Utp12 Family 538 632 IPR007148 -
Pvu3g1129 681 Gene3D - 55 199 IPR015943 GO:0005515
Pvu3g1129 681 Gene3D - 200 324 IPR015943 GO:0005515
Pvu3g1129 681 PANTHER OS03G0300300 PROTEIN 58 680 - -
Pvu3g1129 681 ProSiteProfiles Trp-Asp (WD) repeats profile. 252 294 IPR001680 GO:0005515
Pvu3g1129 681 SUPERFAMILY Quinoprotein alcohol dehydrogenase-like 65 318 IPR011047 -
Pvu3g1129 681 MobiDBLite consensus disorder prediction 641 681 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1129 173 286 U-box Gene Family AT2G33340 28.814 1.83e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1129 K14546 - gmx:100815458 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1129 3 26968643 26977318 Pvu3g1129 3 26968643 26977318 ECH