Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1126 ATGGGGAGAATGGGACAAGACTCAGACCCCAAGTCCAAGTTGGTATTAGAGATTTGCTCCATTTCCACGCGTTCTGTGGTATGTGCTCATCATACATTTCTCTCAAAACCAGCTAACGCAACATTCGTTGACTGGTATTGCATTATTGGAGTGGAAGAAAATGCAGGGGTGAATGCCATTCGCAAGAGGTACCATAAACTGGCCTTACAAGTTCATCCAGATAAGAATAAACACCCCAAGGCTGAAATTGCTTTCAAGCTCGTTTCTGAGGCCTATGCATGTCTATCTAATGCAGCAAAGAGAAAAGACTTTGACGTGGAGAGATATAAGCATTTCTGCATCGAGTGCAGAAGAATTCCGTATACATCGAGCAATGCCCCTGTCAATTCAGGTGGATCAGGTTTTAAGGCATGGCACATCATCACCAGGTCAAGATCTTTTAAACTTTGGAGAAATATTAGGGAAATGAGAGAAAGATTCATGGACGAGGCTAAGGTGATAGAGAACTGTTTGCGAACAAATTCAATGTCAAGGAAAGAATCTCCACGCCAAAATCCGGTTGGCTTTCTACATAGAAGCAAGTCGCTTCATAGATATGAGAAAGAAACCCCTGTTTTCGATCCGTCGGATTACCTGTACCAAGGGTACCCTCATCTGAGGAGCAATATTTACAAGAATTCTTCAACTTTTTGGTACTTGCAGAGAAATAGTATGCATCACAATGAAAAAGGAGGTGCTCTGCATGCCTCCCCTGTTTTTGAGGTCCAATCTAGGAGTTTGTTTGCTGGCAAATTCGCTTTTGTTCCGTCAAAATGTTAG 819 0.4249 MGRMGQDSDPKSKLVLEICSISTRSVVCAHHTFLSKPANATFVDWYCIIGVEENAGVNAIRKRYHKLALQVHPDKNKHPKAEIAFKLVSEAYACLSNAAKRKDFDVERYKHFCIECRRIPYTSSNAPVNSGGSGFKAWHIITRSRSFKLWRNIREMRERFMDEAKVIENCLRTNSMSRKESPRQNPVGFLHRSKSLHRYEKETPVFDPSDYLYQGYPHLRSNIYKNSSTFWYLQRNSMHHNEKGGALHASPVFEVQSRSLFAGKFAFVPSKC* 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1126 272 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 6 258 - -
Pvu3g1126 272 SUPERFAMILY Chaperone J-domain 38 108 IPR036869 -
Pvu3g1126 272 CDD DnaJ 44 97 IPR001623 -
Pvu3g1126 272 PRINTS DnaJ domain signature 46 64 IPR001623 -
Pvu3g1126 272 PRINTS DnaJ domain signature 64 79 IPR001623 -
Pvu3g1126 272 PRINTS DnaJ domain signature 80 100 IPR001623 -
Pvu3g1126 272 ProSiteProfiles dnaJ domain profile. 44 108 IPR001623 -
Pvu3g1126 272 ProSitePatterns Nt-dnaJ domain signature. 85 104 IPR018253 -
Pvu3g1126 272 PANTHER BNAC03G44070D PROTEIN 6 258 - -
Pvu3g1126 272 SMART dnaj_3 43 100 IPR001623 -
Pvu3g1126 272 Gene3D DnaJ domain 43 166 IPR036869 -
Pvu3g1126 272 Pfam DnaJ domain 44 105 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1126 Pvu-Chr3 26920488 26921973 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1126 44 105 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 39.394 2.42e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1126 - - gmx:100801809 486.108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1126 3 26920488 26921973 Pvu3g1126 3 26920488 26921973 ECH
Pvu3g1126 3 26920488 26921973 Pvu9g2604 9 36503205 36504591 PCT