Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1122 ATGGATATTGACTCTCCCCGCTTCCTTCAAACAATTTCAACTTTGGTTCTCATTCTAGTTTCTGTTTCATCACTGGCCTCAACGTCTCTCAAAGTGGGTTTCTACACCTCCACATGTCCATCTGCGGAGGAAATAGTGAGAAGTGTTGTGAACAAAGGCATTTATGAAAACCATGGCATAGCTGTTGGTCTTATTAGATTGCATTTCCATGACTGCTTTATTAGGGGTTGTGAGGGTTTTGTACTGCTAGCATCAACCCCGGGCAATCCAATAGCGGAGAGAGACCATTTTTCCAACAACCCAAGCTTACGTGGGTTCGAGGAGGCCAAGATACAGTTGGAGGCTGCATGTCCTAGAACGGTGTCGTGTGCAGACATATTGGCATTCGCCGCACGAGACAGTGCTCTGAAAGTTGGTGGCATAAACTACAACGTTACATCAGGACGAAGAGACGGCCGTGTCTCTATCGCTGATGAAGGTTTGTCTGCAGATGAAATGGTGACACTTTCAGGAGCCCATTCGATTGGTGTGTCGCACTGTTCAACCTTCCCAAAGCGCTTGTACTCTTTCAATGACACGTTCAAGCAAGACCCCTCCATGGACTCTTTCTACGCTGAAACGTTGATGACCAAATGTCCTGCACCACCTGCCACCTCAGACCCAACGTTGTCTCTTGATCCTTCCACTCTGGTTCGTTAG 699 0.475 MDIDSPRFLQTISTLVLILVSVSSLASTSLKVGFYTSTCPSAEEIVRSVVNKGIYENHGIAVGLIRLHFHDCFIRGCEGFVLLASTPGNPIAERDHFSNNPSLRGFEEAKIQLEAACPRTVSCADILAFAARDSALKVGGINYNVTSGRRDGRVSIADEGLSADEMVTLSGAHSIGVSHCSTFPKRLYSFNDTFKQDPSMDSFYAETLMTKCPAPPATSDPTLSLDPSTLVR* 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1122 232 PRINTS Haem peroxidase superfamily signature 61 75 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 ProSiteProfiles Plant heme peroxidase family profile. 29 232 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PANTHER PEROXIDASE 25-RELATED 159 229 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PANTHER PEROXIDASE 25-RELATED 20 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 ProSitePatterns Peroxidases active site signature. 61 72 IPR019794 GO:0004601
Pvu3g1122 232 PRINTS Plant peroxidase signature 39 58 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PRINTS Plant peroxidase signature 63 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 Gene3D - 33 157 - -
Pvu3g1122 232 Gene3D Peroxidase, domain 2 158 229 - -
Pvu3g1122 232 ProSitePatterns Peroxidases proximal heme-ligand signature. 165 175 IPR019793 -
Pvu3g1122 232 Pfam Peroxidase 46 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 Pfam Peroxidase 157 226 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pvu3g1122 232 PANTHER PEROXIDASE 159 229 - -
Pvu3g1122 232 PANTHER PEROXIDASE 20 159 - -
Pvu3g1122 232 SUPERFAMILY Heme-dependent peroxidases 30 227 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1122 Pvu-Chr3 26867746 26873775 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1122 15 229 Peroxidase AT4G11290 40.417 6.28e-60 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1122 K00430 - gmx:100815350 346.28