Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1119 ATGAAAGATGAATTAAGAAAAAGGCATTCATGCGTGTCTGTTTTTACCAAAATTAGCGATCCAAGCTACAGAACCAACCAACCGTTAACTCAAGAACAGAACACCTTCCCTTTCTCTGGATTCCAACATCTGATTCTCCTCTTTCCATCACCTCCCTACGCTCTTCCCTCTCTCCCTCCCTGCAATTTAGAAATGAATTCCAACTACGGCCAATCCAGCACGAACAAATCCCCCTCCGTGTCCCTCAACAACTTGAATTTCGATTTCGATCTTGGCATCGGATCCAACCGTCCCAAATCCCTCAACGACCAGAAAAACCCCAAACCTTCCTATTCCACCACCACCACCACCTCTTCCTATTCCTATCCATATTCCTCCGCCCAGCCCAACAAACAACCCTCATGGACCCACCAACCGGCTCCCACTCAGACCACCTCCCTGCCCGGTGGGCCCCCCTCCATGGTCGGAGACATCTTCGGCAAGAGCTGGGGAACCACTCAACCTTCTACTGCTTCCAAAAACATTGGGATCATTAATAAGAACCCTAATCTCTTCGGAGATTTGGTCAGTTCTGCTTTGGGCCAGGGTTCCAAGTCTCCTGCTACCAATGTTCCTCTCAAAAACGCTACCCCCACCCCCAATAAAGCCTCCTTTTCCATGGGAAACATGGCCGATTCTTTGCCCAAAACTGCTGCCACGCCACAGAGCAGTGCTAGTTGGGCATCATCTTCTGGGGGGTTTAGCGTGAATGCCAACAAAACCCCCAATCTTGGGGGCACTTCAATGCGAAACATGGGTAGTGGAATTGGGACCAGTTCTAATAACAAGGATCCTTTTAGTTCTTTGTCTGGTTTTGGATCCAAGCAGTCTGCTACTCTTAATTCAGCTGCCAAAGGGCCGAAGGTTGCATCCGGGGATGATGGTTTTGGAGATTTCCAAAATGCTTCCAAATCGAGCTCGGATGGTTTTGGGGATTTTCAAAATGCTTCAAAACCGAACTCAGCCGCGTTTCCATCGGCTGCTTCTCCTGGGATTGATATCAATTTTGCTGGATCTGCCGCTCCCACTCAGAGTCATGTTCAGAGATCAGGTGGTGGTGATGATCCAATGGACATGTTTTTCACGGCTTCCTCGCCCGCGGTTGGGGGTGCTGCTGCGGCCTCTGATGGATTTGGAGGACAGGACGATTGGGGTTTGGATTCGGAGTTTGGTGGTGGAGGCCATGATGTGGGTGGCACCACTACTGAGCTTGAGGGGCTGCCTCCTCCTCCTGCCGGGGTCTCTAGTTCCACTGCTAAAGGCAAGGGGATGGACAATTACAAGCAAGGACAGTTTGCTGATGCTATTAAGTGGTTTTCGTGGGCCATTGTTCTTCTGGAGAAATCTGGGGACGATACGGCCACAGCGGAGGTTTTGTCATCCAGATCTTCGTGTTACAAAGAAGTCGGGGAGTATAAAAAGGCAGTGGCAGATTGTACAAAGATTCTTCAAAATGATGAAACCAATGTATCTGTCCTGGTACAGCGTGCTCTCTTGTACGAGAGTATGGAAAAGTACAAACTTGGTGCTGAAGACCTTAGGACTGTGCTGAAGATTGATCCTAGTAATAGGATCGCCAGAAGCACCGTTCACCGGTTGGCTAAGATGGCTGAGTAG 1656 0.4952 MKDELRKRHSCVSVFTKISDPSYRTNQPLTQEQNTFPFSGFQHLILLFPSPPYALPSLPPCNLEMNSNYGQSSTNKSPSVSLNNLNFDFDLGIGSNRPKSLNDQKNPKPSYSTTTTTSSYSYPYSSAQPNKQPSWTHQPAPTQTTSLPGGPPSMVGDIFGKSWGTTQPSTASKNIGIINKNPNLFGDLVSSALGQGSKSPATNVPLKNATPTPNKASFSMGNMADSLPKTAATPQSSASWASSSGGFSVNANKTPNLGGTSMRNMGSGIGTSSNNKDPFSSLSGFGSKQSATLNSAAKGPKVASGDDGFGDFQNASKSSSDGFGDFQNASKPNSAAFPSAASPGIDINFAGSAAPTQSHVQRSGGGDDPMDMFFTASSPAVGGAAAASDGFGGQDDWGLDSEFGGGGHDVGGTTTELEGLPPPPAGVSSSTAKGKGMDNYKQGQFADAIKWFSWAIVLLEKSGDDTATAEVLSSRSSCYKEVGEYKKAVADCTKILQNDETNVSVLVQRALLYESMEKYKLGAEDLRTVLKIDPSNRIARSTVHRLAKMAE* 552
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1119 551 MobiDBLite consensus disorder prediction 227 275 - -
Pvu3g1119 551 SMART tpr_5 503 536 IPR019734 GO:0005515
Pvu3g1119 551 SMART tpr_5 429 462 IPR019734 GO:0005515
Pvu3g1119 551 SMART tpr_5 469 502 IPR019734 GO:0005515
Pvu3g1119 551 SUPERFAMILY TPR-like 432 541 IPR011990 GO:0005515
Pvu3g1119 551 Gene3D Tetratricopeptide repeat domain 428 550 IPR011990 GO:0005515
Pvu3g1119 551 MobiDBLite consensus disorder prediction 311 337 - -
Pvu3g1119 551 MobiDBLite consensus disorder prediction 95 156 - -
Pvu3g1119 551 ProSiteProfiles TPR repeat profile. 503 536 IPR019734 GO:0005515
Pvu3g1119 551 PANTHER OS03G0340700 PROTEIN 65 551 - -
Pvu3g1119 551 MobiDBLite consensus disorder prediction 296 434 - -
Pvu3g1119 551 MobiDBLite consensus disorder prediction 195 214 - -
Pvu3g1119 551 MobiDBLite consensus disorder prediction 97 150 - -
Pvu3g1119 551 Pfam Tetratricopeptide repeat 504 536 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1119 428 551 Calmodulin-binding Proteins AT3G25230 29.851 3.57e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1119 - - pvu:PHAVU_003G107800g 1016.91
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1119 3 26806194 26812017 Pvu3g1119 3 26806194 26812017 ECH