Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1112 ATGGAAAACGAGGAAGGTAAGGAAATCGAAGCTAATGATTACGAGCTCAGCGGCAAGATAATGCTAACCGCCATAGTCGCTCTCTTCGTCGTCATCATCATAATGCTTTGCCTCCACGTCTACGTCCGTTGCAGCCTCGTTCGAGCTCGCCGCCGGCAACAACTTCGCCGAAGAAGCAACAGCCCGCAGTTCGTGTTCTACATCGACCCCGCCGCCCGCACTGCCCTCACCTCACGTGGCCTCCACCCCTCCGTCATCTCCACGCTCCCGGTCTTCACCTTCTCTGCTTCCACCCAACCATCGGAATGCGCGGTTTGTTTGTCGGAGTTTCAGAACGGGGAAACGGGTCGGATCTTACCCAAATGCAATCATAGTTTCCACACTGAGTGCATCGACATCTGGTTCCAGTCCCACACCACGTGTCCGCTCTGCAGGGCGCCTGTCGAGGCCATTGCCGACCAAGAAACCCGATCTGAGGTGGCTGTTGTGTGTGAACCCGAGCCGGTTGGGGAAGAGAGGAACCGGTCTATACCAGTTGGTTCTTCTTCTTCTGCGTTGCGTAACGACAGTTTGGGGCGTGAGACGGAGTCGTCATTTCGTTCGCCGGTGAGTAGGATAGTGTCGTTCAAGAGGATTCTGAGCAGAGAGAAGAAGGGAAGCGTTTCGGGGTGTGTGGTGGGAGGGTGCGGCTCCATGACCGAGTTAGATGCAGAACGAGGAGAGTCTGACTCGGTGAGTTGTTGA 744 0.5578 MENEEGKEIEANDYELSGKIMLTAIVALFVVIIIMLCLHVYVRCSLVRARRRQQLRRRSNSPQFVFYIDPAARTALTSRGLHPSVISTLPVFTFSASTQPSECAVCLSEFQNGETGRILPKCNHSFHTECIDIWFQSHTTCPLCRAPVEAIADQETRSEVAVVCEPEPVGEERNRSIPVGSSSSALRNDSLGRETESSFRSPVSRIVSFKRILSREKKGSVSGCVVGGCGSMTELDAERGESDSVSC* 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1112 247 PANTHER RING-H2 FINGER PROTEIN ATL64 3 204 - -
Pvu3g1112 247 SMART ring_2 103 144 IPR001841 -
Pvu3g1112 247 MobiDBLite consensus disorder prediction 171 194 - -
Pvu3g1112 247 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 69 151 IPR013083 -
Pvu3g1112 247 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 3 204 - -
Pvu3g1112 247 CDD RING-H2_EL5_like 102 145 - -
Pvu3g1112 247 SUPERFAMILY RING/U-box 96 151 - -
Pvu3g1112 247 MobiDBLite consensus disorder prediction 176 194 - -
Pvu3g1112 247 Pfam Ring finger domain 102 145 IPR001841 -
Pvu3g1112 247 ProSiteProfiles Zinc finger RING-type profile. 103 145 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1112 Pvu-Chr3 26725475 26726766 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1112 14 244 Rapid Response to Elicitors AT3G16720 40.925 6.88e-55 177
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1112 - - gmx:100800859 329.717
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1112 3 26725475 26726766 Pvu3g1112 3 26725475 26726766 ECH
Pvu3g1112 3 26725475 26726766 Pvu9g2588 9 36352671 36354000 PCT