Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1100 ATGGAGGAGCCTCAGTATCGGGAACATCCCAAAACCAAAATCACCGCCATTCCGCCGCCGCAGCACTCCGACGGCGCCTCCGGGGAGTTGCGTGGCGTCGATTGCAACCTCGCCTCCCTCTGCGAGCATGTCCAAATCGAAGGCTTCAATTCGGGTTCCTTCTCCGATATCGTCGTCAATGCCATGGGTTCCACTTATCACCTTCATCGGCTTATCCTCTCGCGCAGTTCCTATTTCAGGAACATGCTTCACGGGCCTTGGAAAGAAGCCAGTGCTCCTGTGGTGACTCTGCATGTTGATGATAAGAATGTTAATGATGAGGCAATTGCAATGGCTTTGGCATACCTATACGGGCACCACCCTAAGCTTAATGATAATAATGCATTTCGTGTTCTTGCTGCTGCATCCTTCCTTGACCTTCAGGATTTATGTGGAATTTGTACAGATTTCATTATATCTGAGCTGTGGACTTCAAACTTCTTGGCTTATCAGGTGTTTGCCGAGAACCAAGACTATGGCATTCATGGGGAGCGTGTTAGAACTGCCTGCTGGGGTTACCTTTGTCAAAGTGGTGGAATGGAATTGAAAGAGGTGCTTCCTAAACTTTCATCGCAAACATTACATGCATTACTGACTTCTAATGATCTATGGATACCCAATGAAGAGAAAAGGTTTGAATTGGCTCTGCACACATTCCTGGCAAAAGGTGCTCATTGCAAGGTTGAACATCCTTCGCATGGAATTTCTGGTTCTGAGTCTGCTAGTGGTATTCATGCTGATTCTAACAGCAAGGGAAAAAGTGTAATTGATAGCTGCACTAGTAAGAGGTTGGAAACTGACCTTGGGAAAATGAATCTTAAAAGTGATCTAAAGGACCCTAGCACTCCAAGTGTTCTAATTGAGCTTGCAGATGCAGTGGCAGACTTCAACGATGGTGTTTCTGTTTCGAATGAACAGGTTCAACAAGCTTCATATGTCAGTTCACCAAACCTGAATCCAAGATATTCTTGTGACGTGGAAGGAACATCATTGGGTAATTCGTTGCCTGATACAGATGGGATGAGAACATCATGCTATGTGGAGATGTCTCTTGGTGCTGGAGCAACTGCTGTGGTAGCCCCTGGAGTGGGTATTGAAGGACCATCTGAAGAAGGACCTTGCTACCAGTTGGAGGACAATAGTTGGTTAGTTAGGAATCCATCAAGCCAATGCTTTTCCTCAAATTCTTGTAGTGAGCTCAATTCCAGTGATTGGGGAAGATATGTTTCATGGAATGGCCAAGTTGTTGGCAGAAGACAGCTTAAAGCTCACCACAGAGGAAACTACAGAGGTCATGGGGATGAATATGATGCATTTTTCAATATATTTGAAGGGGGGTCCCTTTTATACTGCAATATGTCTTTTGATGCGCTTCTAAATGTCAGAAAGCAACTTGAAGAATTAGGTTTCCCTTGCAAAGCTGTAAATGATGGTCTTTGGCTGCAGATGCTTCTTAGTCAGAGAGTACAAGAAATTGCAGCTGATACATGCAAAGTTTGCTCCCTCATGAATTGTACTTGTGAGAAGCAATTTGCATTTTCCCATGGAACTCCTACAACTGGATCTTACATGCAAGAACATAATCAGAACATTATGCCTGGCAATATGGGAAATATATATGTTGCTGAATCTTCTGCCGGTGAAAGAAATGGCCTTTTTAGACCTGTACGAGTGCATGTTAGAGGTGCTATTGATGGGCTTGCAGGTATTGGACGTGGAACTACTTTTGTTCCGGCATCTGCTTCGCCTCCTACACGTTTTGTCTTTTCTCGTGTACCATTTGGTGTTGGCAACAGAAACTATCCTCAGTCTGCAGCCAATGATGATTCAGAGACACGTGCTGACCCAAATGGAGACCTGTCTGGAGATGGATTGACAGCTGTAGTTGGTTTAAGCCTGGGAGGGACTAATGGAACAAATGTACATACAGAGCTAACACAAAGGGGATATGAAATGGGCATGCAAAGCAGCATGTCTGGAAGTAATGCTGGAGATGCAAGTACTGGTGGTATCCCCATGCAGATGTTAGAGACACCAGAACATACCATTGGTATAGAATGGGACAATGTCAACAGTACTTCTATATCACTGGATATGAAAACACCTTTAAGCCATTTCCCCCCTTTTCGCTTTGGTGTACGTTTTGAGGATGTGCATAGGCTTGGTGATGGCCAGGTCAAGCATTCTACAGAAGTTTTCTACGCTGGTTCTTTGTGGAAGGTCAGTGTACAAGCTTTTAATGATGAAGACCCCCAGGGACGGCGAACCCTTGGGTTGTTTCTTCATCGTCGGAAAGCAGAGATAACTGATATGCATAGAAAGGTGCACATGTATGTTGACTCACGTGAAAAGGTGACTGCACGCTACCAGTTGACTGTCCCATCCAAGAGGGAAATGATGGTGTTTGGAAGCTTTAAACAAACAGGCACACTTCTACCTAAATTTCCCAAGGGATGGGGTTGGCGAACTGCTCTGCTATTTGATGAGCTTGCTGATCTTCTCCAAAACGGTGCCCTAAGGGTCATTGCTGTAGTGCAGCTTGTATGA 2586 0.4486 MEEPQYREHPKTKITAIPPPQHSDGASGELRGVDCNLASLCEHVQIEGFNSGSFSDIVVNAMGSTYHLHRLILSRSSYFRNMLHGPWKEASAPVVTLHVDDKNVNDEAIAMALAYLYGHHPKLNDNNAFRVLAAASFLDLQDLCGICTDFIISELWTSNFLAYQVFAENQDYGIHGERVRTACWGYLCQSGGMELKEVLPKLSSQTLHALLTSNDLWIPNEEKRFELALHTFLAKGAHCKVEHPSHGISGSESASGIHADSNSKGKSVIDSCTSKRLETDLGKMNLKSDLKDPSTPSVLIELADAVADFNDGVSVSNEQVQQASYVSSPNLNPRYSCDVEGTSLGNSLPDTDGMRTSCYVEMSLGAGATAVVAPGVGIEGPSEEGPCYQLEDNSWLVRNPSSQCFSSNSCSELNSSDWGRYVSWNGQVVGRRQLKAHHRGNYRGHGDEYDAFFNIFEGGSLLYCNMSFDALLNVRKQLEELGFPCKAVNDGLWLQMLLSQRVQEIAADTCKVCSLMNCTCEKQFAFSHGTPTTGSYMQEHNQNIMPGNMGNIYVAESSAGERNGLFRPVRVHVRGAIDGLAGIGRGTTFVPASASPPTRFVFSRVPFGVGNRNYPQSAANDDSETRADPNGDLSGDGLTAVVGLSLGGTNGTNVHTELTQRGYEMGMQSSMSGSNAGDASTGGIPMQMLETPEHTIGIEWDNVNSTSISLDMKTPLSHFPPFRFGVRFEDVHRLGDGQVKHSTEVFYAGSLWKVSVQAFNDEDPQGRRTLGLFLHRRKAEITDMHRKVHMYVDSREKVTARYQLTVPSKREMMVFGSFKQTGTLLPKFPKGWGWRTALLFDELADLLQNGALRVIAVVQLV* 862
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1100 861 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 7 861 - -
Pvu3g1100 861 Gene3D Potassium Channel Kv1.1; Chain A 31 188 IPR011333 -
Pvu3g1100 861 PANTHER BTB/POZ DOMAIN-CONTAINING PROTEIN 7 861 - -
Pvu3g1100 861 MobiDBLite consensus disorder prediction 248 268 - -
Pvu3g1100 861 Pfam BTB/POZ domain 49 153 IPR000210 GO:0005515
Pvu3g1100 861 ProSiteProfiles BTB domain profile. 55 125 IPR000210 GO:0005515
Pvu3g1100 861 SMART BTB_4 55 155 IPR000210 GO:0005515
Pvu3g1100 861 MobiDBLite consensus disorder prediction 245 268 - -
Pvu3g1100 861 MobiDBLite consensus disorder prediction 1 28 - -
Pvu3g1100 861 MobiDBLite consensus disorder prediction 613 633 - -
Pvu3g1100 861 SUPERFAMILY POZ domain 49 153 IPR011333 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Pvu3g1100 BTB 9.2e-14 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1100 - - gmx:100806711 1603.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1100 3 26141782 26147663 Pvu3g1100 3 26141782 26147663 ECH