Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1096 ATGGAGGATTCCTTAGAGCAAAAATGGAAGCAGCGAGAGTTCACGTTGGAATCAGTTTCCGACCTATCTTCCGCTCCTCCGTCCGCTTCTTTGCCAGGAATAGCTCGCTTTGACTCCGACGGTCTCCAAATTCATCACCAATCTCAACAGATTCCACTCAGTATCGATCCTCGAACTGTTCTGTTATTCAAGCTGAGTCCTGTTCAATCTGTTTGCGTGGTGGAAGGATCTGAGGTCGGTAAAAAGCCATTGTTTTCCAGGGGAGTCAGTATCCAGTTTAAAAATGAGGAGGAAAGTGCAGCCTTCCATTGTGTAGTCCAACAATGGAAGAAGGAAGTCCATGCTCAAGGAGGAAATGGGCGAAATGGAACTGTTACAACTTCTAAAAGCAAATTTGATGAAAAGATAGAGTCATCATCTGCGAAAATGTATTTTCATTATTACGGACAACTTCTGCATCAGCAAAATATGTTACAGGACTATGTGCGGACAGGCACCTATCATGCTGCTGTTATTGAGAACCGGTCTGATTTTGCTGGTCGTGTTGTAGTTGATGTGGGTGCTGGTAGTGGTATTTTATCATTATTTGCTGCTCAGGCTGGTGCAAAACACGTTTATGCTGTGGAAGCATCTGAAATGGCAGAATATGCACGGAAACTTATAGCCGGAAACCCAACACTAGCTCAAAGAATTACAGTGATCAAAGGCAAAGTTGAGGAGATTGAATTGCCAGAGAAAGCAGACATTCTGATATCTGAGCCCATGGGCACCTTGTTAGTCAATGAGAGAATGCTGGAGTCTTATGTCATTGCCCGAGATAGGTTTCTTGTTCCAACGGGGAAAATGTTTCCATCTCTGGGAAGGATTCACATGGCTCCTTTCACTGATGAATATTTGTTTATAGAAATTGCTAATAAGGCACTGTTTTGGCAGCAACAGAACTATTACGGCGTTGATTTAACACCCTTACATGGGACTGCATTTCAAGGATACTTTTCTCAGCCTGTGGTGGATGCTTTTGATCCAAGACTTTTAATAGCCCCTTCAATATTCCATGTGATAGACTTCTCCAAAATAAAGGAGGAAGAACTGTATGAAATTGATATTCCTCTGAAATTCGTAGCCTCTGTGGGCACGAGAGTGCATGGGTTAGCTTGTTGGTTTGATGTGCTGTTCAATGGAAGTACTGTGCAAAGGTGGCTTACCACTGCTCCTGGTTCTCCGACAACCCATTGGTACCAGTTACGTTGTGTTCTCTCACAGCCAATATATGTCATGGCTGGACAAGAAATTACTGGCAGGCTTCACTTGATTGCCCACAATGCACAGAGTTATACAATATACTTAACATTGTCAGCTAAAATGTGGGGTCCTGGTGCTGAACAAGGGGGAATTCTCCAAACATCTTCCTGTAAACTTGATCTGAAAGAACCCTATTATAGAATGTCTCAACCACAGGCTTATGCATTTGCTCAAGATCAACAACCTCAACTACTTATACCAACGCAGGATGTAGATGAACCCGAAATAGTACGACAGCCTTCGCCTAATTCAAGTGTCCAGATTGATTCACTGATGCAGAATATTTAG 1590 0.4296 MEDSLEQKWKQREFTLESVSDLSSAPPSASLPGIARFDSDGLQIHHQSQQIPLSIDPRTVLLFKLSPVQSVCVVEGSEVGKKPLFSRGVSIQFKNEEESAAFHCVVQQWKKEVHAQGGNGRNGTVTTSKSKFDEKIESSSAKMYFHYYGQLLHQQNMLQDYVRTGTYHAAVIENRSDFAGRVVVDVGAGSGILSLFAAQAGAKHVYAVEASEMAEYARKLIAGNPTLAQRITVIKGKVEEIELPEKADILISEPMGTLLVNERMLESYVIARDRFLVPTGKMFPSLGRIHMAPFTDEYLFIEIANKALFWQQQNYYGVDLTPLHGTAFQGYFSQPVVDAFDPRLLIAPSIFHVIDFSKIKEEELYEIDIPLKFVASVGTRVHGLACWFDVLFNGSTVQRWLTTAPGSPTTHWYQLRCVLSQPIYVMAGQEITGRLHLIAHNAQSYTIYLTLSAKMWGPGAEQGGILQTSSCKLDLKEPYYRMSQPQAYAFAQDQQPQLLIPTQDVDEPEIVRQPSPNSSVQIDSLMQNI* 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1096 529 CDD AdoMet_MTases 183 286 - -
Pvu3g1096 529 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 1 492 IPR025799 GO:0016274|GO:0018216
Pvu3g1096 529 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 137 452 IPR025799 GO:0016274|GO:0018216
Pvu3g1096 529 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 147 458 IPR029063 -
Pvu3g1096 529 PANTHER HISTONE-ARGININE METHYLTRANSFERASE 1.4-RELATED 1 492 - -
Pvu3g1096 529 Gene3D Vaccinia Virus protein VP39 122 284 IPR029063 -
Pvu3g1096 529 Gene3D - 286 494 - -
Pvu3g1096 529 Pfam Ribosomal protein L11 methyltransferase (PrmA) 179 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1096 Pvu-Chr3 26109124 26115483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1096 144 434 C2H2 Transcription Factor Family AT3G12270 33.981 3.11e-39 149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1096 K05931 - gmx:100780736 966.452
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1096 3 26109124 26115483 Pvu9g2566 9 36114738 36123145 PCT