Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1069 ATGGCTCCTTCTAGGAAATCTAGAAGTGTAAATAAGAGGTTTTCCAGTGTTCATGAGACTGCATCTAGTAAAGACAAAATTACAGAGAATGGTAGCAAAAATAGGCTGAAGGCGAGTCCTGGTATTCAAAAGAAGAGAAGATTGGCTGACATGTTAGGACCACAATGGAATAAGGAGGAGCTTGGGCATTTTTATGAAGCTTACCGTAAATATGGGAAAGATTGGAAGAAGGTTGCTCTTGCAGTACGTAATAGGTCTGCAGAAATGGTAGAGGCACTGTACACTATGAACAGGGCATATTTATCTCTCCCAGAGGGTACTGCTTCTGTTGTTGGACTGATAGCAATGATGACAGATCATTATAGTGTACTGGGAGGAAGTGACAGTGGTAAAGAAAGCAATGATGATGCAGAGATATCTAAAAAGTCTCAAAAGCGTCTGCGGGGAAAGCATCCAAGTGACAATAAACCATTAGATGGGCACCTTTCAGATCATTCTCAGTCACATTCTGTTGCATCAGGTGATGGTTGCCTGTCATTGTTGAAGAAGAGACATTCTGGAATTAGGCCACATGCTGTTAGGAAAAGGACTCCCCGTGTCCCTATTTCTTATTCTATTGGTAAAGATATTGGGGAGAGGTTTTTTTCATCTGTAAGGCAGGGTTCCAAACAAATGGTTGATACTAATGATGTTACTCATAAGATTGCATTGGCATTGACTGAGGCTTCCCAAAGAGGTGGCTCTTCAAAAAATTCTGGATCACCAGAGAAGAAATTTTTATCTTCACCTGGTCTGAAAAGTGGGAAGAAGCATTCAAAATCAGAAAAAGCTGGAGCCAAGTTTTGCAGTTCTGAGTTGGATGATGGTAGTTCTGAGTTGAGTTTAGGAAGCACTGAAGGTAATAATGAAGATTACTCTAGAAAAACAATTCATCGGAGTGGTAGAGAAATTACTGGAAGAGGAAGGAATCAAGAAAAGAAAATAAAACAATATGGGAAGAATTTAGAGCCTGAGGGGAATTTAAACAAGCATTTGAATGACATAAAGGAAGCCTCCAGTGGGACAGATGATGGTAAAATTTTTATCAAATCCAGCTTCAACACTGATTTTGTAGATGCAAAAAATGCAAGGTCCTCTTACAAGGGTTCCAGGACGAAAAGTAAAAAGCTACTGTTGGAGAAAGATGAAGGTTCTGCTTTTAATGCTTTGAAAACTTTGGCTGATTTGTCTTTGATGCTGCCAGTAACAAACCCTGACACTGAGTCATCTGCACAGTTCAAGGAAGGGAACCATGATGTTGTTGGTGAATCTAAAATGGAAACACATAAAGTATTTCCTAAGATTGAAAGCACTGCTTCAAGTAAGTTTTCCAAGGTTTTTTCTGATAATGGAGCTGTTGTACCTGAAGCAGAGGGAACACTCCAGCTTAATGCAGGATTCAGGAAAAGGAAACAAAAATCTTTTAACTTGAAAAATGATGAAACTCATACTGGTTCTCATTTAAGTGGTTCCCAGAAAACCAAGGTATGCAATTATTGA 1539 0.3925 MAPSRKSRSVNKRFSSVHETASSKDKITENGSKNRLKASPGIQKKRRLADMLGPQWNKEELGHFYEAYRKYGKDWKKVALAVRNRSAEMVEALYTMNRAYLSLPEGTASVVGLIAMMTDHYSVLGGSDSGKESNDDAEISKKSQKRLRGKHPSDNKPLDGHLSDHSQSHSVASGDGCLSLLKKRHSGIRPHAVRKRTPRVPISYSIGKDIGERFFSSVRQGSKQMVDTNDVTHKIALALTEASQRGGSSKNSGSPEKKFLSSPGLKSGKKHSKSEKAGAKFCSSELDDGSSELSLGSTEGNNEDYSRKTIHRSGREITGRGRNQEKKIKQYGKNLEPEGNLNKHLNDIKEASSGTDDGKIFIKSSFNTDFVDAKNARSSYKGSRTKSKKLLLEKDEGSAFNALKTLADLSLMLPVTNPDTESSAQFKEGNHDVVGESKMETHKVFPKIESTASSKFSKVFSDNGAVVPEAEGTLQLNAGFRKRKQKSFNLKNDETHTGSHLSGSQKTKVCNY* 513
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1069 512 MobiDBLite consensus disorder prediction 242 357 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 242 258 - -
Pvu3g1069 512 PANTHER LIN-9 1 505 IPR010561 GO:0006351|GO:0017053
Pvu3g1069 512 Pfam Myb-like DNA-binding domain 55 90 IPR001005 -
Pvu3g1069 512 Gene3D - 3 108 - -
Pvu3g1069 512 SUPERFAMILY Homeodomain-like 52 99 IPR009057 -
Pvu3g1069 512 CDD SANT 56 90 IPR001005 -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 1 41 - -
Pvu3g1069 512 PANTHER PROTEIN ALWAYS EARLY 1-RELATED 1 505 IPR028306 -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 268 282 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 126 174 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 287 303 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 304 333 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 1 17 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 494 512 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 340 356 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 18 32 - -
Pvu3g1069 512 MobiDBLite consensus disorder prediction 488 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1069 Pvu-Chr3 25265166 25280218 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Pvu3g1069 Myb_DNA-binding 6e-06 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1069 - - pvu:PHAVU_003G102800g 998.423