Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1047 ATGCCTGTTGGAGCAATGTTCCAGAAACTGACCACAGTGATGACCTCTGATCATGCCTCCGTTGTCTCTATGAACATTTTTGTTGCCCTTCTGTGTGCTTGCATCATAATCGGTCATCTGTTGGAAGAGAACCGGTGGATCAATGAATCCATCACTGCCCTTCTCATTGGTCTTTGTACTGGGGTCTCTATACTGCTTACTAGTGGAGGAAAAAGCTCTCATATACTAGTCTTCAGTGAAGATCTTTTCTTCATTTACCTTCTCCCACCCATCATTTTCAATGCCGGGTTTCAGGTGAAGAAGAAACAATTTTTCCGCAATTTTATGACTATTATGCTCTTTGGTGCAGTTGGTACTTTGATATCATTCTGCATCATATCACTGGGTGCCATACATTTTTTTCAGAAGTTGGACATTGGTTCCCTCAAGCTTGGAGATTTTCTAGCAATCGGAGCAATATTTTCAGCAACAGATTCAGTTTGCACGTTGCAGGTTCTTAATCAGGATGAGACTCCTTTACTATATAGCCTGGTCTTTGGGGAGGGGGTAGTAAATGATGCTACCTCTGTAGTGCTCTTCAAAGCAATTCAGAATTTTGATCTCTCTCACATTGACTTAAGTACAGCCTTACAGTTAATAGGAAATTTTTTATATTTATTCATTGCAAGCACTGTGTTGGGAATCTTTGCTGGATTGCTTAGTGCTTACATCATAAAAAAACTGTATTTTGGAAAGCTCATAAGGCATTCTACAGACCGTGAGGTTGCTCTCATGGTACTCATGGCATACCTTTCATATATGCTGGCTGAACTATTTTCTTTAAGTGCCATTCTGACTGTTTTCTTCTGCGGAATTGTTATGTCTCACTACACTTGGCATAATGTAACTGAAAGTTCAAGGGTGACAACAAAGCATGTTTTTGCCACTTTGTCATTCATTGCTGAAATATTCATCTTCCTTTATGTGGGGATGGATGCATTAGATATAGAAAAGTGGCGAATCGTAAGTGAAAGCCCAAGAAAATCTATTGGGGTCAGTTCGTTGCTGTTGGCACTTATTCTAGTGGGAAGAGCTGCATTTGTTTTTCCTTTGTCCTTCTTATCCAACTTGTTTAAGAAGTCTCAAGCTGAGAAAACTGATTTAAAGCAACAAGTAACAATTTGGTGGGCAGGTCTCATGCGTGGAGCTGTTTCTATAGCACTTGCTTACAATCAGTTTACCAGGTCAGGCCATACTAAATTGCGAGAGAATGCCATCATGATCACTAGTACCATCACTGTTGTACTCTTCAGCACATTGGCATTTGGGTTGATGACAAAGCCACTTGTAAGACTGTTGCTTCCTTCCTCTAAGCATGTGATGAGCTTGGCGTCCCCACCATCGACACCAAAATCATTCACAGTGCCACTTCTTGGCAGTGGAAGAGAGGATTCATCATGGGCCAATGGTGGCACCCCAAATGGGCCTCCTCCAACCACCTTTAGGATGCTACTTAGCTGCATTCCTACTCGTGGGGTGCACCACTATTGGCGCAAGTTTGATGATTCTGTCATGCGACCCGTGTTTGGTGGACGAGGTTTTGTGCCCTACGTTCCCGGGTCACCCCTTGAACAAACCATTCATCAGTGGCATGGCAGCTAG 1641 0.426 MPVGAMFQKLTTVMTSDHASVVSMNIFVALLCACIIIGHLLEENRWINESITALLIGLCTGVSILLTSGGKSSHILVFSEDLFFIYLLPPIIFNAGFQVKKKQFFRNFMTIMLFGAVGTLISFCIISLGAIHFFQKLDIGSLKLGDFLAIGAIFSATDSVCTLQVLNQDETPLLYSLVFGEGVVNDATSVVLFKAIQNFDLSHIDLSTALQLIGNFLYLFIASTVLGIFAGLLSAYIIKKLYFGKLIRHSTDREVALMVLMAYLSYMLAELFSLSAILTVFFCGIVMSHYTWHNVTESSRVTTKHVFATLSFIAEIFIFLYVGMDALDIEKWRIVSESPRKSIGVSSLLLALILVGRAAFVFPLSFLSNLFKKSQAEKTDLKQQVTIWWAGLMRGAVSIALAYNQFTRSGHTKLRENAIMITSTITVVLFSTLAFGLMTKPLVRLLLPSSKHVMSLASPPSTPKSFTVPLLGSGREDSSWANGGTPNGPPPTTFRMLLSCIPTRGVHHYWRKFDDSVMRPVFGGRGFVPYVPGSPLEQTIHQWHGS* 547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1047 546 PANTHER SODIUM/HYDROGEN EXCHANGER 7 544 IPR018422 GO:0006812|GO:0015299|GO:0016021
Pvu3g1047 546 Gene3D - 143 195 - -
Pvu3g1047 546 PRINTS Na+/H+ exchanger signature 82 93 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g1047 546 PRINTS Na+/H+ exchanger signature 96 110 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g1047 546 PRINTS Na+/H+ exchanger signature 111 119 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g1047 546 PRINTS Na+/H+ exchanger signature 151 161 IPR004709 GO:0006814|GO:0006885|GO:0015385|GO:0016021|GO:0055085
Pvu3g1047 546 Pfam Sodium/hydrogen exchanger family 26 444 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Pvu3g1047 546 PANTHER SODIUM/HYDROGEN EXCHANGER 3 7 544 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1047 Pvu-Chr3 24545600 24549273 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1047 9 542 Antiporters AT3G05030 74.488 0.0 812
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1047 - - ccaj:109808409 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1047 3 24545600 24549273 Pvu3g1047 3 24545600 24549273 ECH