Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1041 ATGGACTGCAATAAAGAAGAGGCCTTGAGGGCCAAGGATATTGCTGAAAAGAAGATGGAAAACAGGGATTTTGTGGGGGCCCGTAAAATTGCTCTAAAGGCTCAGCAGCTGTACCCTGATCTGGAAAATATTGCTCAAATGCTTGTTGTTTGTGATGTGCACTGCTGTGCTGAGAAGAAATTGTTTGGTAATGAGATGGATTGGTATGAAATTCTTCAGGTTGAACAGACAGCTGTTGATGCACTAATTAAGAAGCAATATAAAAAGTTCGCCCTCCAACTCCATCCTGACAAAAACAAGTTTGCTGGTGCTGAAGCCGCATTTAAGCTGATTGGGGAAGCTCAAAGAGTACTTTTGGACAGAGAAAAACGTTATCATTTTGACATGAAGCGAGGAGTTACAGTGAACAAACCTGCTACATCACATTTTAGTACTACGGTGTGTAGGAATGTTAGGCCCAACTTTACAAGCTCAACTTCTCAGCAGCAGCAGCAATCTAGGCAGCCAATGCAGCAGCAATCTAGGCAGCCAATGCAGCAGCAGCAATCTAGGCAGTCAATGCAGCAGCAGCAAAATGGTGTACGCCCTACTTTTTGGACAGTCTGCCCATTTTGTTCAGTTAGGTATCAATATTACAAAGAAATTTTAAATAAAACTCTTCGCTGTCAAAATTGTAAAAGGCCCTTTGTTGCATATGAAGTGGAAAAACAAGGTACACCATCACCAGCAACTAATTCAACTCAGAAAGCTTATGACCAGCAGAAAGGTGGTTTGAATCAAGGTTCTTTTAAGGTAGGTGCTGGATCTCAAGGAAATTCACATGCTGAGAAGTCCAATACAGGGTCATCTGATAAGAAGGGACCTGCTAGTGTTTCTGAAGAACTTAATGGAAGGAGAAAAAGGAAGCAGGTAGCAGAATCCAGTGAAAGTTCTGACCAGCAGAAAGGTGTTTTGAATCATGGTTCTTTCAAGGTAGGTGCTGCATCTCAAGGCAATTCACATGCTGAGAAGTCTAATACACGGTCAACTGATAAAAAGGAACCTGCTAGTGTTTCTGGAAAACTTAATGGAAAGAGAAAAAGGAAGCAGGTGGCAGAATCCAGTGAAAATTCCGATCCTTTGAGCGAAAGTGATTCAGAAAAAGATAAAGTTGCTGGAAAGGGTGGTTATTCCAGTGTAGAAAACCATTCAATTTCTAGAGAAGGGCAGCCACGCAGATCTACCCGAAAGAGGCATCAAGTTTCCTACAAGGAGAATGTGAACAACAATGATGATGGGTTCTCAGAACGATGTGGTGATGGTGAGGCCCATGGTGAGAAAAGTAAAATGAATGATCAGAATGGTTTAGCTGCTGCACACAAAGAAGTAAATCAGAAGCAACACTTGTATTCGGAAAGGAATGAGGAAACTAACATGTCTAAGGGAAAAGATGTTGTGGGAGGGTCGAAGCAGGTGGATGAAACCTCAGATCATTCTCCAGATTTAACCTCCAAAGTATCAAATCAACCAAATGTTTATGTCTTCCCTGATGCAGAGTTCGGTGATTATGACAAAGATAAGAGAAAAGAATGTTTTGCTGCTGGGCAGATATGGGCTGTTTATGACACAGCAGAAGGTATGCCTAGATTCTATGCTTTAATCAGGAAAGTTCTGTCTCCTGGATTCAAACTGCAGATAACATGGTTTGAATCACATCCTGACTGGAAGGATGAAATCAAGTGGGTGAACGAGGAATTGCCTGTTGCTTGTGGGAAATATAAACTTGGTGACACTGACGTCACTGAAGATCATCTGATGTTCTCTCATCTTGTTTTGTGTGAAAAAGTTAGCCGTACTACTTTTAAAGTGTATCCTAGAAAGGGAGAAACTTGGGCCCTTTTTAAAAATTGGGATATTAAGTGGTACATGGATGTGAAATCTCACCAGCGGTATGAATATGAGTTTGTTGAAATCTTGACAGATTATGATGAAGATGAGGGTGTATATGTTGTTTACTTGACTAAGTTGAAAGGTTTTGTAAGTCTCTTCCTTCAAAGTATAAAGGAAGCCAAAAAATCATTTCAAATTCCACCACTGGAGTTATTTAGATTCTCTCACAGGGTTCCATCTTTCAAAATGACTGGTGAGGAAAGGGCTGGTGTACCTACAGGATCTTATGAACTTGATCCTGGAGCTTTGCCAGTAAATTTTGAAGAGAAGGTTGCTCACGGTGCATCTGGTGGTGAGAATACAGGGACTTCAGATAGATCAGAACCCTTGAAGACATCTGAGAGAGGTAGTTCCATTCCCAAGGATAATTTGGAAGGAAGCAGTTTGGTGAGAGAGAACAAGGATTCTGTAGATGACAGCGATGATTGTTGTGCTCCTCCAGCACCCAGATCTAAAACAATTGAAATTCCTGATACTCAATTCTTTAATTTTGATGCTGGGAGGTCCCTTGAGAAGTTTCAGATTGGTCAAATTTGGGCATTTTACAGTGACGAGGATGGATTGCCAAAATACTACGGCCACATTAATAAGATTGTGACAAGTCCAGATCTTGAATTACACGTTTCCTGGCTTACTTGCTACTGGCTACCAGAGAATACCACTGAATGGGAGGACAAAGATATGGGTATGCTTATTTCATGCGGCCGATACAAAGTTAATAAAACAGATGAATTTCTCAGTATTTATAGTACTACCTCTTCTGTTTCACATCAAGTGCATGCTGATGCTGTTGGAAAGAATAAGAATTATGCCATCTTTCCGAGGAAAGGTGAAGTTTGGGCGTTATATAGAAAATGGACAAATAAAATGAAATGTTCTGAGTTGAAAAAATGGGAGTATGACATAGTGGAAGTTATTGAAGAAACTGATTTGTTCATTAATGTTGTAGTTCTGGAGTTTGTCAGTGGGTTTAGTTCCGTTTACAGGGGCAAATCAAATGAAGGATCATCTGTCAACCTGAGAATACCAAAAAAAGAGTTGCTTAGGTTCTCCCACCAAATCCCAGCTTTCAAACTGACAGAAGAGCATGGAAAACTGAGAGACTTCTGGGAACTTGATCCGGGTGCCCTCCCAATTCATTGTTATGGCTTGAGATGA 3087 0.4078 MDCNKEEALRAKDIAEKKMENRDFVGARKIALKAQQLYPDLENIAQMLVVCDVHCCAEKKLFGNEMDWYEILQVEQTAVDALIKKQYKKFALQLHPDKNKFAGAEAAFKLIGEAQRVLLDREKRYHFDMKRGVTVNKPATSHFSTTVCRNVRPNFTSSTSQQQQQSRQPMQQQSRQPMQQQQSRQSMQQQQNGVRPTFWTVCPFCSVRYQYYKEILNKTLRCQNCKRPFVAYEVEKQGTPSPATNSTQKAYDQQKGGLNQGSFKVGAGSQGNSHAEKSNTGSSDKKGPASVSEELNGRRKRKQVAESSESSDQQKGVLNHGSFKVGAASQGNSHAEKSNTRSTDKKEPASVSGKLNGKRKRKQVAESSENSDPLSESDSEKDKVAGKGGYSSVENHSISREGQPRRSTRKRHQVSYKENVNNNDDGFSERCGDGEAHGEKSKMNDQNGLAAAHKEVNQKQHLYSERNEETNMSKGKDVVGGSKQVDETSDHSPDLTSKVSNQPNVYVFPDAEFGDYDKDKRKECFAAGQIWAVYDTAEGMPRFYALIRKVLSPGFKLQITWFESHPDWKDEIKWVNEELPVACGKYKLGDTDVTEDHLMFSHLVLCEKVSRTTFKVYPRKGETWALFKNWDIKWYMDVKSHQRYEYEFVEILTDYDEDEGVYVVYLTKLKGFVSLFLQSIKEAKKSFQIPPLELFRFSHRVPSFKMTGEERAGVPTGSYELDPGALPVNFEEKVAHGASGGENTGTSDRSEPLKTSERGSSIPKDNLEGSSLVRENKDSVDDSDDCCAPPAPRSKTIEIPDTQFFNFDAGRSLEKFQIGQIWAFYSDEDGLPKYYGHINKIVTSPDLELHVSWLTCYWLPENTTEWEDKDMGMLISCGRYKVNKTDEFLSIYSTTSSVSHQVHADAVGKNKNYAIFPRKGEVWALYRKWTNKMKCSELKKWEYDIVEVIEETDLFINVVVLEFVSGFSSVYRGKSNEGSSVNLRIPKKELLRFSHQIPAFKLTEEHGKLRDFWELDPGALPIHCYGLR* 1029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1041 1028 SMART dnaj_3 66 123 IPR001623 -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 291 308 - -
Pvu3g1041 1028 SUPERFAMILY Chaperone J-domain 63 130 IPR036869 -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 338 367 - -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 238 289 - -
Pvu3g1041 1028 CDD DnaJ 67 120 IPR001623 -
Pvu3g1041 1028 Pfam DnaJ domain 67 128 IPR001623 -
Pvu3g1041 1028 PRINTS DnaJ domain signature 69 87 IPR001623 -
Pvu3g1041 1028 PRINTS DnaJ domain signature 87 102 IPR001623 -
Pvu3g1041 1028 PRINTS DnaJ domain signature 103 123 IPR001623 -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 740 767 - -
Pvu3g1041 1028 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 236 442 - -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 463 501 - -
Pvu3g1041 1028 PANTHER - 1 314 - -
Pvu3g1041 1028 PANTHER - 323 1025 - -
Pvu3g1041 1028 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 323 1025 - -
Pvu3g1041 1028 PANTHER DNAJ HEAT SHOCK AMINO-TERMINAL DOMAIN PROTEIN 1 314 - -
Pvu3g1041 1028 Pfam Domain of unknown function (DUF3444) 794 1005 IPR024593 -
Pvu3g1041 1028 Pfam Domain of unknown function (DUF3444) 504 710 IPR024593 -
Pvu3g1041 1028 Gene3D DnaJ domain 64 197 IPR036869 -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 770 784 - -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 152 192 - -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 736 793 - -
Pvu3g1041 1028 MobiDBLite consensus disorder prediction 428 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1041 Pvu-Chr3 24403770 24408287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1041 4 236 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 31.933 9.19e-28 114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1041 - - pvu:PHAVU_003G100000g 2035
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1041 3 24403770 24408287 Pvu6g1667 6 27232846 27238286 PCT