Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1021 ATGGGTTGTGTCCATGGCAAGTGTTGCTGTGGTGAGAATTCTTCATCAGATGATGGTTCTAAGGATTACCGAGAAACTGCCTTCATTCGTGGGCACATGAAAAACGTACTTTCACAGAGATCACTGAAGCGTGCTACTGTTCCTTCTCACAACTTCAATTTGGAATACACTTTTCTCACTCAGCGGGGGTACTACCCTGACTCACCTGATAAAGAAAACCAAGATAGTTTTTGCATTAGTACAGAACTCCAAGGTGACCCCAGTGTCCATTTCTTTGGTGTCTATGATGGGCACGGTCAATTTGGTAGCCAGTGTTCAAATTTCGTGAAGGATAGGCTGGTAGAGAAGTTGGTAAATGACCCTGCATTGTTGGAGGACCCTGTCCAAGGTTACAATTCTGCATTCTTGGCAACGAACCTTGAATTACGTAGTAGTAGTGAGATTGATGATTCTATGAGTGGCACCACCGCGATAACGGTGCTTGTTATTGGTGACACCCTTTTTGTTGCTAATGTTGGTGATTCGAGAGCGGTGATGGCTGTTAAGGATGGGAACCGCGTTGTTGCGGAGGACTTGTCCTCTGATCAGACGCCGTTTCGGAAAGATGAATATGAGAGAGTGAAGCTTTGTGGGGCAAGGGTGTTGAGTGTTGATCAGGTGGAAGGGCTTAAGGATCCAGATATCCAGAATTGGGGTGATGAAGAGAGTCGGGGTGGTGATCCTCCCAGATTGTGGGTTCCTAATGGGATGTATCCTGGAACTGCTTTTACAAGGAGCATAGGCGATAGTTTAGCAGAGACAATTGGTGTCACTGCTACTCCTGAGGTGAAAACTTTTCGGCTTACACCTGATCATCTTTTCTTTGTTGTGGCAAGTGATGGCATTTTTGAATTCCTGACAAGCCAAACTGTTATTGATATGGCAGCAAGCTATATGGATCCTCGTGATGCTTGTGCGGCTATTGCAGAAAAGTCATATAAACTATGGTTGGAACTTGAGAACAGAACAGATGATATAACAATTATCATTGTTCAGATCAAAGGTCTCTCTAATTCAGGTACATTTGGAGTTGGATCAGATGAGATCAATGAAGGCGCTGTAATGAGTTCCAGGACAGGAACTCCTGAGATACCTGCTGCCCATGAATCTGATGTTCATCCTTCTCTCGGAACCAGTTTCTCTGGTCAGCCTGCGGCTTCAGTGATGAGCCCAGCCATAGAGGTTCACTCTCCAGCATGTCCAAAACCAATTGATTGA 1257 0.4511 MGCVHGKCCCGENSSSDDGSKDYRETAFIRGHMKNVLSQRSLKRATVPSHNFNLEYTFLTQRGYYPDSPDKENQDSFCISTELQGDPSVHFFGVYDGHGQFGSQCSNFVKDRLVEKLVNDPALLEDPVQGYNSAFLATNLELRSSSEIDDSMSGTTAITVLVIGDTLFVANVGDSRAVMAVKDGNRVVAEDLSSDQTPFRKDEYERVKLCGARVLSVDQVEGLKDPDIQNWGDEESRGGDPPRLWVPNGMYPGTAFTRSIGDSLAETIGVTATPEVKTFRLTPDHLFFVVASDGIFEFLTSQTVIDMAASYMDPRDACAAIAEKSYKLWLELENRTDDITIIIVQIKGLSNSGTFGVGSDEINEGAVMSSRTGTPEIPAAHESDVHPSLGTSFSGQPAASVMSPAIEVHSPACPKPID* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1021 418 SUPERFAMILY PP2C-like 43 348 IPR036457 -
Pvu3g1021 418 PANTHER PROTEIN PHOSPHATASE 2C AND CYCLIC NUCLEOTIDE-BINDING/KINASE DOMAIN-CONTAINING PROTEIN 34 355 - -
Pvu3g1021 418 Gene3D - 39 348 IPR036457 -
Pvu3g1021 418 PANTHER CYCLIC NUCLEOTIDE-DEPENDENT PROTEIN KINASE 34 355 - -
Pvu3g1021 418 SMART PP2C_4 51 344 IPR001932 -
Pvu3g1021 418 CDD PP2Cc 71 346 IPR001932 -
Pvu3g1021 418 ProSitePatterns PPM-type phosphatase domain signature. 91 99 IPR000222 GO:0043169
Pvu3g1021 418 ProSiteProfiles PPM-type phosphatase domain profile. 55 346 IPR001932 -
Pvu3g1021 418 Pfam Protein phosphatase 2C 80 324 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1021 Pvu-Chr3 23670558 23674138 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1021 1 351 PP2C-type Phosphatase Gene Family AT3G06270 69.122 6.91e-175 490
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1021 - - gmx:100797866 717.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1021 3 23670558 23674138 Pvu3g1021 3 23670558 23674138 ECH
Pvu3g1021 3 23670558 23674138 Pvu6g1641 6 27060871 27065095 PCT