Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1016 ATGCCCTCATCCCCCTCCCCCTCCCCCTCCCCTGCGCCCCCCTCCTCCCGCCGCCTCCCTCCTCCCTGTTGGTCACCCGATGAAACCCTCGCCCTCATCGACGCCTACCGTGATAAGTGGTATTCCCTCGGCCGCGGCAACCTCAAGGCCACCCACTGGCAAGAGGTCGCCGACGCCGTAGCAAACCGCTGCCCCAACGCCTCTCCTCCCAAAACCCCCGTCCAGTGCCGCCACAAAATGGAGAAGCTCCGCAAGCGCTACCGCACCGAGATCCAACGCGCTCGCTCCCTCCCCGTCTCCCGATTCAACTCCTCCTGGGTCCACTTTAAGCTAATGGACTCCATGGAGAAAGGTCCCTCTCCTGTCAAACCCGAACACGATTCCGATAGCGACAACGATGATGACGACAACGACGATGATCAAGATCTGTACCAGGAGATCAGCCACAACGGCCACACCCGGAGCTTGAACAAATTGTACAGGAACGGGTTTCCGGGTGTCGGTGCGGGTGGGTTTAGGATTCGAATTCCCACCGGGATGGCCCCTGCTCAACCCGGGTCTGGCTCCAAGTTGTTTGGGAAGGTTGGGAATCAGAAATTCAGCCCTAATTTGAATCAAAACCCTAACCCTAATTTTGGGAAGAAGAGAGAAAGAGACCCGGTGGGGGAGATGGTGGCTGCGATTAAGGTTTTAGGAGATGGGTTTGTGAGGATGGAACAGATGAAGATGGAGATGGCGAGGGAGATTGAGAGCATGCGGATGGAGATGGAAATGAAGCGCACTGAGATGATTCTGGAGTCTCAACAACGGATTGTTGAAGCCTTTGCCAAGGCAGTTTCAGAAAAGAAGAAGGCCAAGACTGTGTCTTCGCCGCAGCAGCCCTAA 885 0.565 MPSSPSPSPSPAPPSSRRLPPPCWSPDETLALIDAYRDKWYSLGRGNLKATHWQEVADAVANRCPNASPPKTPVQCRHKMEKLRKRYRTEIQRARSLPVSRFNSSWVHFKLMDSMEKGPSPVKPEHDSDSDNDDDDNDDDQDLYQEISHNGHTRSLNKLYRNGFPGVGAGGFRIRIPTGMAPAQPGSGSKLFGKVGNQKFSPNLNQNPNPNFGKKRERDPVGEMVAAIKVLGDGFVRMEQMKMEMAREIESMRMEMEMKRTEMILESQQRIVEAFAKAVSEKKKAKTVSSPQQP* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1016 294 Coils Coil 242 262 - -
Pvu3g1016 294 Gene3D - 24 89 - -
Pvu3g1016 294 Coils Coil 77 97 - -
Pvu3g1016 294 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 9 288 IPR044823 -
Pvu3g1016 294 SMART 118neu2 31 120 IPR006578 -
Pvu3g1016 294 MobiDBLite consensus disorder prediction 1 21 - -
Pvu3g1016 294 PANTHER TRANSCRIPTION FACTOR 9 288 - -
Pvu3g1016 294 MobiDBLite consensus disorder prediction 115 143 - -
Pvu3g1016 294 Pfam Myb/SANT-like DNA-binding domain 22 115 IPR044822 -
Pvu3g1016 294 MobiDBLite consensus disorder prediction 1 23 - -
Pvu3g1016 294 ProSiteProfiles Myb-like domain profile. 24 84 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1016 Pvu-Chr3 23507451 23508637 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1016 23 115 Trihelix Transcription Factor Family AT3G14180 37.634 9.05e-17 78.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Pvu3g1016 Myb_DNA-bind_4 1.8e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1016 - - vun:114179736 511.146