Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g1010 ATGGGTGGTCAGATGCAGCAGAGCAATGCAGCCGCCACTGCTCTGTATGACCACGCCGGCGCCGGACCCCTCCACAATGCGGCGGGGCCAGCCACTGATGCTGGCGACGCTGTCATGGCGCGCTGGTTACAATCCGCTGGCTTGCAGCATCTGGCCTCTCCATTGGCTTCCACTGCTATCGATCAACGCCTCCTCCCCAATCTTCTTATGCAGGGTTATGGAGCGCAGTCTGCAGAAGAAAAGCAGAGGCTTTTTAAGTTAATGAGAAACCTTAATTTTAATGGGGAATCTGGTTCTGAGCCATATACGCCCACTTCCCAAAGTTTAGGTGGAGGAGCTGTATCAGATGGGTTTTATTCTCCAGACTTCAGGGGAGATTTTGGAGCCGGGCTTCTGGATCTTCATGCTATGGATGATACAGAACTTTTGTCTGAGCATGTTATTTCAGAACCCTTTGAGCCATCACCCTTTATGCCTGGAGGCGCTAGAACTTTTGAAGATGACTTCAATCCAATTAGCAGAAAGCAGGAAAGAAGAGAAGCAGATGCTGATGCATCAGTTTTCTTACCTACAAATGAAAAAGAGAATAATACAAGAGAAAATAATGTTGCTAAGATTAAAGTTGTGGTACGAAAAAGACCTTTAAATAAGAAGGAGCTTGCTAAGAAGGAGGATGACATTGTAACTGCCTTTGACAGTGCATATTTGTCAGTCCATGAACCGAAACTAAAGGTGGATTTGACAGCTTATGTGGAGAAACATGAGTTCTGTTTTGATGCTGTTCTTGACGAGAATGTTACCAATGATGAAGTATATCAAGTAACAGTAGAACCAATTATTCCTACAATTTTTGAGAGAACCAAAGCTACTTGTTTTGCTTATGGTCAGACAGGAAGTGGCAAAACATACACGATGCAACCGTTGCCACTCAGAGCTGCCGAAGATCTTGTTAGACAGTTGCGTCGACCAGTATATCGAAACCAAAGATTTAAATTGTGGCTTAGCTACTTTGAGATATATGGTGGAAAACTTTTTGATCTTCTTAGTGACAGAAAAAAACTCTGCATGAGAGAAGATGGACGGCAGCAAGTGTGTATTGTAGGACTGCAAGAATTTGAAGTGTCTGACGTACAGATTGTCAAAGAATTCATTGAAAAGGGAAATGCAGCAAGAAGTACGGGGTCAACTGGTGCAAATGAGGAGTCCTCCAGGTCACATGCTATCTTGCAACTGGTTGTAAAGAGGCACAATGAGATAAAAGAGAGTAAGCGGAATAATAATGAGGGAAATGAAGCAAAAAGTGGGAAGGTTGTGGGGAAGATATCTTTTATTGATCTTGCTGGAAGTGAAAGAGGTGCTGATACTACTGACAATGACCGTCAGACAAGGACCGGAGTTCGTGACGAATGA 1410 0.4383 MGGQMQQSNAAATALYDHAGAGPLHNAAGPATDAGDAVMARWLQSAGLQHLASPLASTAIDQRLLPNLLMQGYGAQSAEEKQRLFKLMRNLNFNGESGSEPYTPTSQSLGGGAVSDGFYSPDFRGDFGAGLLDLHAMDDTELLSEHVISEPFEPSPFMPGGARTFEDDFNPISRKQERREADADASVFLPTNEKENNTRENNVAKIKVVVRKRPLNKKELAKKEDDIVTAFDSAYLSVHEPKLKVDLTAYVEKHEFCFDAVLDENVTNDEVYQVTVEPIIPTIFERTKATCFAYGQTGSGKTYTMQPLPLRAAEDLVRQLRRPVYRNQRFKLWLSYFEIYGGKLFDLLSDRKKLCMREDGRQQVCIVGLQEFEVSDVQIVKEFIEKGNAARSTGSTGANEESSRSHAILQLVVKRHNEIKESKRNNNEGNEAKSGKVVGKISFIDLAGSERGADTTDNDRQTRTGVRDE* 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g1010 469 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 195 461 IPR027417 -
Pvu3g1010 469 MobiDBLite consensus disorder prediction 448 469 - -
Pvu3g1010 469 Pfam Kinesin motor domain 211 461 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 Gene3D Kinesin motor domain 184 466 IPR036961 -
Pvu3g1010 469 PANTHER KINESIN-RELATED PROTEIN 6 5 464 - -
Pvu3g1010 469 SMART kinesin_4 203 464 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 MobiDBLite consensus disorder prediction 452 469 - -
Pvu3g1010 469 PRINTS Kinesin heavy chain signature 286 307 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 PRINTS Kinesin heavy chain signature 396 413 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 PRINTS Kinesin heavy chain signature 440 458 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 ProSitePatterns Kinesin motor domain signature. 439 450 IPR019821 GO:0003777|GO:0005524|GO:0007018
Pvu3g1010 469 ProSiteProfiles Kinesin motor domain profile. 205 469 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Pvu3g1010 469 PANTHER KINESIN-LIKE PROTEIN 5 464 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g1010 Pvu-Chr3 22315758 22323780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g1010 197 451 Calmodulin-binding Proteins AT5G65930 32.210 3.28e-26 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g1010 K10393 - gmx:100778915 868.996