Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0985 ATGTACACATCAAGGAAGAAAATCCACAAAGATAAGGATGCTGAGCCAACTGAATTTGAGGAGTCAGTTGGACAGGCATTCTTTGATCTTGAAAATACTAACAATGAGCTGAAAAGTGATCTGAAAGATTTATACATAAATTCAGCCGTCCAGATAGATGTTTCTGGGAACCGCAAGGCTGTGGTTATCCATGTCCCCTACAGATTAAGGAAAGGATTCAGGAAGATCCATGTCAGGCTTGTGAGAGAACTTGAGAAAAAATTTAGCGGGAAGGATGTAGTCCTGATTGCCACCCGTAGGATATTGAGGCCACCAAAGAAAGGTTCAGCTGTTCAGCGTCCACGCAGCCGCACACTCACTGCTGTGCATGAGGCAATGCTGGAGGACATTGTATTACCTGCTGAGATTGTTGGAAAGCGGGTTAGGTATAGAATTGATGGTTCCAAGATTATGAAGGTGTTTTTGGACCCCAAGGAGAGAAACAACACTGAATACAAGTTGGAAACTTTTGCTGCAGTATACAGGAAGTTTTCAGGCAAAGATGTTGTATTTGAATATCCTACAACCGAGGCTTAG 576 0.4288 MYTSRKKIHKDKDAEPTEFEESVGQAFFDLENTNNELKSDLKDLYINSAVQIDVSGNRKAVVIHVPYRLRKGFRKIHVRLVRELEKKFSGKDVVLIATRRILRPPKKGSAVQRPRSRTLTAVHEAMLEDIVLPAEIVGKRVRYRIDGSKIMKVFLDPKERNNTEYKLETFAAVYRKFSGKDVVFEYPTTEA* 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0985 191 ProSitePatterns Ribosomal protein S7e signature. 79 92 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pvu3g0985 191 Pfam Ribosomal protein S7e 7 186 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pvu3g0985 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 IPR000554 GO:0003735|GO:0005840|GO:0006412
Pvu3g0985 191 PANTHER 40S RIBOSOMAL PROTEIN S7 2 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0985 Pvu-Chr3 19492644 19495007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0985 1 191 Cytoplasmic Ribosomal Protein Gene Family AT1G48830 76.440 1.19e-112 317
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0985 K02993 - gmx:100499757 369.007
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0985 3 19492644 19495007 Pvu2g3264 2 47764190 47766326 ECH
Pvu3g0985 3 19492644 19495007 Pvu3g0985 3 19492644 19495007 ECH