Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0984 ATGACCTTATTCTCCTGGTTGTGCCCATGTTTCAGGAAGGGCGGCGCAACCTCCGACGCCGGCGGCGACCACCACGACGATCCCACCGAGCCGGGGGACTCCTTGGACCTGATCTTCGACCTCCACACTCTCCAACTCGCTACCAACTTCTTCAGCAGCCTCAACCAGCTTGGTCATGGAGGCTTTGGTCCTGTCTTCAAGGGAATGATGCCAAATGGTCAAGAAGTAGCGGTTAAGAAGCTGTCATTGGAATCTAGACAAGGAGTTAAAGAATTCACCAACGAAGTCATGCTATTACTCAGAATTCAGCACAAGAACTTGGTTACATTACTTGGTTGTTGTGCAGAAGGGCCTGAAAAGATGCTTGTCTATGAGTATCTACCTAACAAAAGCCTTGATCACTTTCTGTTTGATAAGAGGAAGTCTTCATCTTTGGACTGGGCAAAACGATTCAGAATAGTTACTGGTGTGGCAAGAGGACTTCTCTACCTGCATGAAGAGGCCCCAGAAAGAATTATACACAGGGACATTAAAGCTAGTAACATATTATTGGATGACAAGTTAGTTCCGAAAATTTCAGACTTTGGTTTGGCAAGGCTGTTTCCTGGGGAAGACTCTCACGTGCAGACATTTAAGATTTCCGGTACACATGGTTACATGGCTCCTGAATATGCATTGCGAGGATATCTGTCAGTGAAGACGGATGTTTTCAGTTATGGAGTTCTGGTCTTGGAAATAGTTAGTGGGAGAAAAAACCAAGATATGCGACTTGGGCCAGAAAAAGCAGATCTCTTGAGCTATGCATGGTCGCTTTATCAAGGAGGGAGGATAATGGAATTGATTGATTCAACTCTCGGTAAATACAATGGTGACGAGGCAGCAATGTGCATTCAGCTAGGTTTGTTGTGCTGCCAATCAAGCATAATTGAAAGACCTGACATGAATGCTGTTCATCTCATGCTCTCAAGTGATTCCTTCACTTTGCCAAGACCAGGTAAACCAGGAATTCAAGGTCGTGCAGGACATTGGACTACAACTACATCTACTGCTTTGACCAATACCAATCCTAGTAATACTACCAGGGCCTCAGGTGGTAGTGGTAGTTTTATAGAGGATTATTCTAGAAATTCTATATCTACCTCTTCTTTTGATGAAGGCAGATGA 1164 0.4459 MTLFSWLCPCFRKGGATSDAGGDHHDDPTEPGDSLDLIFDLHTLQLATNFFSSLNQLGHGGFGPVFKGMMPNGQEVAVKKLSLESRQGVKEFTNEVMLLLRIQHKNLVTLLGCCAEGPEKMLVYEYLPNKSLDHFLFDKRKSSSLDWAKRFRIVTGVARGLLYLHEEAPERIIHRDIKASNILLDDKLVPKISDFGLARLFPGEDSHVQTFKISGTHGYMAPEYALRGYLSVKTDVFSYGVLVLEIVSGRKNQDMRLGPEKADLLSYAWSLYQGGRIMELIDSTLGKYNGDEAAMCIQLGLLCCQSSIIERPDMNAVHLMLSSDSFTLPRPGKPGIQGRAGHWTTTTSTALTNTNPSNTTRASGGSGSFIEDYSRNSISTSSFDEGR* 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0984 387 ProSitePatterns Serine/Threonine protein kinases active-site signature. 172 184 IPR008271 GO:0004672|GO:0006468
Pvu3g0984 387 CDD STKc_IRAK 57 321 - -
Pvu3g0984 387 SUPERFAMILY Protein kinase-like (PK-like) 36 321 IPR011009 -
Pvu3g0984 387 Gene3D Phosphorylase Kinase; domain 1 25 126 - -
Pvu3g0984 387 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 2 385 - -
Pvu3g0984 387 PANTHER PROTEIN KINASE SUPERFAMILY PROTEIN 2 385 - -
Pvu3g0984 387 MobiDBLite consensus disorder prediction 347 373 - -
Pvu3g0984 387 Gene3D Transferase(Phosphotransferase) domain 1 127 327 - -
Pvu3g0984 387 Pfam Protein tyrosine and serine/threonine kinase 54 252 IPR001245 GO:0004672|GO:0006468
Pvu3g0984 387 ProSiteProfiles Protein kinase domain profile. 51 321 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0984 387 SMART serkin_6 51 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0984 Pvu-Chr3 19488399 19491927 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0984 27 338 Receptor kinase-like Gene Family AT4G11490 51.274 2.82e-113 342
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pvu3g0984 PK_Tyr_Ser-Thr 2.5e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0984 - - aprc:113868075 663.299