Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0969 ATGAACATGGTATCAGTGTCAGCGGTGTGCAAGGCGGTGGGGAGTTTCAACCCGGGAGTGACGATGGAGACGCTGTCGTTTTTCAGGCAGCGCAACAAGGAAAAGGTTGTGGTGATAGTTGGAGCAACGGGGACAGGAAAGTCAAAGCTTAGCATAGACCTTGCCACGCACTTCCCACCAGCGGAGATAGTCAACTCCGACAAAATGCAAGTGTACGAAGGTCTGGACATCACCACCAACAAAGTCACAGAAGAGGAGTGCCGAGGGGTCCCACACCATCTCCTAGGCACGGTCCAATCCAACATGGATTTCAGTGTCAACGACTTTTGCCACCACGCCACCCTCGCCGTTGGCTCCATTTTGAAACGCGACGGCTTGCCCATCATTGCGGGTGGGTCCAACTCTTTCCTCGACGCCTTGGTCAATCACTACCCTGACTTTCGGTTGCGCTACCACTGTTTGTTCCTCTGGGTCGACGTCTCCCTCCCGGTGCTCCATTCCTCTCTCTCCGCACGTGTGGATCGCATGATCCGCGCCGGCCAGGTCGACGAGGTTCGACAATTTTTCCAATACCACAACGACGACTACACTGTGGGCATTCGAAAGGCCATTGGCGTCCCCGAGTTTCATTCCTTTTTCCAAGCCGAAGCTGACGGAGCCGACGAGAGGACCAAGGACAAGCTCCTCCAGGCTGCCATTGCCTCCATCAAAATAAACAACTGCAACCTCGCCACCCGACAGCGCCACAAAATTCACCGCCTCCACGCCATTTTCAAACGGAACATGCACCGCCTCGACGCCACCGATGTTTTCCTCAGGAGCACTCCCCAAGAAGCAGAACAAGCGTGGGAGGATCACGTTCTATCCAAAAGCCGAAGGATTCTTCACAACTTCCTCTACGACGACACGCATGTTGATGTTGCTCTTGCTTCTGTTATTGCTTCTTCGTCGCCGCCCATGGCTGCTGCCGCCGCAACTCGCTAG 984 0.5488 MNMVSVSAVCKAVGSFNPGVTMETLSFFRQRNKEKVVVIVGATGTGKSKLSIDLATHFPPAEIVNSDKMQVYEGLDITTNKVTEEECRGVPHHLLGTVQSNMDFSVNDFCHHATLAVGSILKRDGLPIIAGGSNSFLDALVNHYPDFRLRYHCLFLWVDVSLPVLHSSLSARVDRMIRAGQVDEVRQFFQYHNDDYTVGIRKAIGVPEFHSFFQAEADGADERTKDKLLQAAIASIKINNCNLATRQRHKIHRLHAIFKRNMHRLDATDVFLRSTPQEAEQAWEDHVLSKSRRILHNFLYDDTHVDVALASVIASSSPPMAAAAATR* 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0969 327 Pfam IPP transferase 70 146 - -
Pvu3g0969 327 Pfam IPP transferase 150 249 - -
Pvu3g0969 327 Gene3D Crystal structure of tRNA isopentenylpyrophosphate transferase (bh2366) domain 162 262 - -
Pvu3g0969 327 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 24 305 IPR039657 -
Pvu3g0969 327 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 33 191 IPR027417 -
Pvu3g0969 327 PANTHER ADENYLATE ISOPENTENYLTRANSFERASE 5, CHLOROPLASTIC 24 305 - -
Pvu3g0969 327 Gene3D - 33 299 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0969 Pvu-Chr3 19179812 19181667 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0969 150 303 C2H2 Transcription Factor Family AT2G27760 28.333 8.40e-13 67.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0969 K10760 - gmx:100778430 475.322
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0969 3 19179812 19181667 Pvu6g1603 6 26718306 26720084 PCT