Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0962 ATGACCACCTCAGCGGCTATAGAACAATTCGACAAATGCATGAATGGGCAAATAGAAGCAATTGCACGGGTCTGGCATTTAGTTCAAGCCTACAAAAAGGACAAAATTCCTTTCAAAATAGACGAGGGTCTGTATTTGGGTTCGATTGGCACTGCAGTTAACAAGGCTGCTATGAAAGACCATAATGTTACTCACATTTTGACTGTGGCCGGTAGAATACCACCTGCACATCCTGATGATTTTGTCTATAAAATTATATGTGTTGTTGACAAAGACAATGAAGACTTAAAACAATACTTCAATGAGTGTTTTGATTTTATTGATGAAGCCAAAAGACTCGGTGGAGGTGTTTTGGTTCACTGTTTTGCTGGAAGATCAAGGAGTGTGACTATAGTTGTGGCATATCTGATGAGGACTCGTGGAATGAGCCTTTTTGAAGCTCTGCAACATGTAAGGAGTATACGACCGGAAGCACGTCCCAATCAGGGTTTCATTTGTCAGCTGGAGGACTTCGAAAAGTCTCTTCAAGATGCCTCTAAGTCACGTTAG 549 0.4135 MTTSAAIEQFDKCMNGQIEAIARVWHLVQAYKKDKIPFKIDEGLYLGSIGTAVNKAAMKDHNVTHILTVAGRIPPAHPDDFVYKIICVVDKDNEDLKQYFNECFDFIDEAKRLGGGVLVHCFAGRSRSVTIVVAYLMRTRGMSLFEALQHVRSIRPEARPNQGFICQLEDFEKSLQDASKSR* 183
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0962 182 ProSiteProfiles Dual specificity protein phosphatase domain profile. 36 177 IPR020422 GO:0006470|GO:0008138
Pvu3g0962 182 Pfam Dual specificity phosphatase, catalytic domain 44 173 IPR000340 GO:0008138|GO:0016311
Pvu3g0962 182 PANTHER DUAL SPECIFICITY PROTEIN PHOSPHATASE 13 177 - -
Pvu3g0962 182 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 37 178 IPR029021 -
Pvu3g0962 182 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 98 156 IPR000387 GO:0016311|GO:0016791
Pvu3g0962 182 CDD DSP 37 170 - -
Pvu3g0962 182 PANTHER BNAA01G23680D PROTEIN 13 177 - -
Pvu3g0962 182 SMART dsp_5 36 174 IPR020422 GO:0006470|GO:0008138
Pvu3g0962 182 Gene3D Protein tyrosine phosphatase superfamily 38 182 IPR029021 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0962 Pvu-Chr3 18877808 18880437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0962 39 176 Protein tyrosine phosphatase (PTP) family AT3G06110 57.971 1.65e-55 171
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0962 - - gmx:100306342 306.605
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0962 3 18877808 18880437 Pvu3g0962 3 18877808 18880437 ECH