Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu3g0937 ATGAGTGAAACAATATTGGTAGTTCTGCTGCTTGTTTTGAATTGTTTGTTGGTTGCAAAAGGAGAAACAGCTGATGAGGATTTTACCACACTTATGTCTCTTATGAGTACCTGGAAGAACACCTCTCCTGATTGGGTGGGTTCAGATCCTTGTGAAGATTGGGAAGGAATCAAGTGCAAGAATACACGTGTTACATCAATAACACTATCAAGTACTGGTTTCGGTGGTCCGCTTTCGGGAGATATTGGATCACTGTCTGAATTGGAAATTTTGGATCTATCTTACAACAAGGACTTTACTGGACCACTTCCAGAATCCATCGGGGAGTTGAGGAAGCTATCAACCTTAATTCTTGTTGGTTGTAACTTCAATGGTCCTATTCCAGACAGCATAGGAAATCTGCAGGAGCTCCTCTTTTTGTCTTTAAATTCCAATAGGTTTAGTGGACCAATTCCACCTTCTATTGGTAGTCTATCAAAACTTTATTGGTTAGATTTAGCAGACAATCAACTTGAAGGGAGCATCCCGGTATCTGGTGACGACATATTTGGTCTTGATAACTTACACCATGCCAAACATTTTCATCTTGGGAAGAATAATCTCTCAGGCACCATCCCTCCTCGACTTTTTGGCCCGGAAATGGCTCTAATTCATTTGCTTTTGGAAAACAATAAACTCGTAGGCAGCATTCCATCTACACTTGGACTAGTTCAAAGTCTGGAGGTGGTGCGCTTAGATAGTAATTCATTAGATGGACCAGTGCCTCCAAACATCAACAATCTTACGAATGTTCGAGATCTGTACTTGTCCAACAATAAACTGTCAGGCCCCCTGCCAAACCTTACTGGAATGGATGCCCTCTGCTACCTGGACATGAGCAACAATAGTTTTAAACCATTGGATTTTCCAGAATGGTTTTCTAATCTTAAGTCCTTAACGACATTAAAGATGGAGCAAACACAACTTCAAGGACAGATTCCCTCTTCTTTGTTTGGACTTGTGAATTTACAGACTGTGGTGCTAAAAGACAACAAAATAAATGGAACCTTGGATGTTGGCTCCTCCTACAGCAGAGAGCTACGACTTGTTGATTTGGAGACTAATTCAATTGACATCTTTAAGCAAAATGAAGTTCCAGGTGTCACAATAATACTTAAAGATAACCCAATTTGCCTAGAAATTGATGAACGAGCGGCATACTGCTCCTCTTATAAATCCAATTTCTCGTATTCAACACCACCAAATAACTGTGTACCTGATACCTGCAAATCAGAAAAGATTCCGAGCCCCAACTGTATATGCGCATATCCATATACAGGAACCTTAGCTTTCAGGGCACCTTCCTTTTCGAACTTGGATAACAAAACACACTACTCAATGCTTGAGGAGTCTCTTATGCGGTATTTTAAGTCTCATTTTGTACCTGTGGATTCGGTTTTGTTGAGCCATCCAATAATGGATCCAACTCAGTATCTGAAATTGAGCTTACAAGCCTTTCCATCAGGACAAGATCATTTCAATCGAACAGGGACTTTACAAATTGGTTTTATGCTAAGCAACCAGACTTTTAAGCCTCCACAGCCGGATTTTGGACCATTTTATTTTCTTGCAGATAAATATGAACACTTTGGGAACTATGAAGGATTGCCTGAATCGGGTAAACATTTAAACATTGGAATCATAGTTGGGGCAGCAGTTGGTGGTTTGGTCTTGCTAGTGTTATTACTCTTATCTGGTCTTTATGCTATCCGCCAGAAGAAAAGGGCCGAAAAAGCGATTGGACAAAGCAATCCTTTTAGACGCTGGGATACGGTTAACAGCAAGAGTGAAGTCCCTCAGTTGAAAGAAGCAAGAATGTTTTCTTTTGAAGAGCTTAAAAAATGCACCAAAAGTTTTTCTCAAGTCAATGACATTGGATCTGGGGGTTTTGGGAAGGTTTATAAGGCAACCCTTCCCAATGGACAAGTGATAGCAATAAAAAGAGCACAAAAAGAATCTATGCAAGGAAAGCTTGAGTTTAAAGCGGAGATTGAACTTCTATCAAGGGTTCACCACAAGAATCTTGTCAGCCTTTTGGGCTTCTGCTTTGACCAAGGAGAGCAAATGCTGGTTTATGAGTATCTTCAAAATGGAAGTTTAAAGGACGCTCTCACAGGGAAGTCGGGAATTAGGTTAGATTGGATAAGAAGGCTAAAAATTGCCCTTGGTACTGCCCGGGGTCTGGCTTATCTTCACGAACTTGTTAATCCTCCCATCATACATAGGGACATCAAATCAAACAATATTTTGCTGGATGACCGCCTAAATGCCAAAGTTTCTGATTTTGGTCTCTCCAAGTCTATGATGGATTCAGAAAAAGATCATGTTACCACTCAAGTTAAAGGAACACTGCCACCGCCCCACTGTCTCACCGGAGCTACCACTACCTCGTTGGAGCAGCCGCCGGACCCTCGTTGGAATCTCGCCAGAGTTGTCGCCGGAATCTCGTCGGAGTTGTCGCCGAAATCTCGTCGGAGCTGTCGCCGAAATCTCACCACCGAAATATCGTTGGAGCCTCCGCTGGAGACGTTGCCGGAATCGCTGTCGGAGCCTTCATCTTTGTTGTTGCCGCCAATTAACCAGTGA 2625 0.4213 MSETILVVLLLVLNCLLVAKGETADEDFTTLMSLMSTWKNTSPDWVGSDPCEDWEGIKCKNTRVTSITLSSTGFGGPLSGDIGSLSELEILDLSYNKDFTGPLPESIGELRKLSTLILVGCNFNGPIPDSIGNLQELLFLSLNSNRFSGPIPPSIGSLSKLYWLDLADNQLEGSIPVSGDDIFGLDNLHHAKHFHLGKNNLSGTIPPRLFGPEMALIHLLLENNKLVGSIPSTLGLVQSLEVVRLDSNSLDGPVPPNINNLTNVRDLYLSNNKLSGPLPNLTGMDALCYLDMSNNSFKPLDFPEWFSNLKSLTTLKMEQTQLQGQIPSSLFGLVNLQTVVLKDNKINGTLDVGSSYSRELRLVDLETNSIDIFKQNEVPGVTIILKDNPICLEIDERAAYCSSYKSNFSYSTPPNNCVPDTCKSEKIPSPNCICAYPYTGTLAFRAPSFSNLDNKTHYSMLEESLMRYFKSHFVPVDSVLLSHPIMDPTQYLKLSLQAFPSGQDHFNRTGTLQIGFMLSNQTFKPPQPDFGPFYFLADKYEHFGNYEGLPESGKHLNIGIIVGAAVGGLVLLVLLLLSGLYAIRQKKRAEKAIGQSNPFRRWDTVNSKSEVPQLKEARMFSFEELKKCTKSFSQVNDIGSGGFGKVYKATLPNGQVIAIKRAQKESMQGKLEFKAEIELLSRVHHKNLVSLLGFCFDQGEQMLVYEYLQNGSLKDALTGKSGIRLDWIRRLKIALGTARGLAYLHELVNPPIIHRDIKSNNILLDDRLNAKVSDFGLSKSMMDSEKDHVTTQVKGTLPPPHCLTGATTTSLEQPPDPRWNLARVVAGISSELSPKSRRSCRRNLTTEISLEPPLETLPESLSEPSSLLLPPINQ* 875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu3g0937 874 ProSitePatterns Protein kinases ATP-binding region signature. 638 660 IPR017441 GO:0005524
Pvu3g0937 874 Gene3D Phosphorylase Kinase; domain 1 602 707 - -
Pvu3g0937 874 Pfam Protein tyrosine and serine/threonine kinase 635 793 IPR001245 GO:0004672|GO:0006468
Pvu3g0937 874 ProSiteProfiles Protein kinase domain profile. 632 874 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0937 874 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 5 797 - -
Pvu3g0937 874 SUPERFAMILY Protein kinase-like (PK-like) 608 797 IPR011009 -
Pvu3g0937 874 Gene3D Ribonuclease Inhibitor 16 179 IPR032675 -
Pvu3g0937 874 SUPERFAMILY L domain-like 58 395 - -
Pvu3g0937 874 SMART serkin_6 632 854 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pvu3g0937 874 Gene3D Transferase(Phosphotransferase) domain 1 708 810 - -
Pvu3g0937 874 Gene3D Ribonuclease Inhibitor 180 281 IPR032675 -
Pvu3g0937 874 Gene3D Ribonuclease Inhibitor 282 421 IPR032675 -
Pvu3g0937 874 MobiDBLite consensus disorder prediction 859 874 - -
Pvu3g0937 874 ProSitePatterns Serine/Threonine protein kinases active-site signature. 752 764 IPR008271 GO:0004672|GO:0006468
Pvu3g0937 874 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE-RELATED 5 797 - -
Pvu3g0937 874 MobiDBLite consensus disorder prediction 850 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu3g0937 Pvu-Chr3 17860493 17866738 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu3g0937 4 808 Receptor kinase-like Gene Family AT5G49760 55.487 0.0 808
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Pvu3g0937 PK_Tyr_Ser-Thr 4.6e-35 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu3g0937 - - gmx:100811702 1253.04
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g0937 3 17860493 17866738 Pvu6g1389 6 24784937 24791041 PCT